Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq10 102 7e-17 seq11 91.5 1e-13 >seq10 Length=65527505 Score = 102 bits (112), Expect = 7e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 |||||||||||| | || ||||||||| ||||| |||| ||| || |||||||| ||| Sbjct 463934 GATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAA 463875 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | |||| |||| ||||| |||||||| ||||| || ||| | || | || || Sbjct 463874 GATGGTAGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTTCTG 463815 Query 115499 AGATTGCGAGGAGGAA 115514 || | | ||||||| Sbjct 463814 AGGCTCAGGGGAGGAA 463799 >seq11 Length=56302525 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 ||||| || |||||||| || || || ||||| ||||| ||| | ||| || || | Sbjct 496789 ATGCAGATCTTTGTCAAGACACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTC- 496847 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||| ||| ||| |||| || || |||||| ||||| ||||| | || || Sbjct 496848 -CGATACTATTG-ACAATGTGAAGGCCAAAATTCAGGATAAGGAAGGGATTCCTCCAGAC 496905 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| ||||| || | ||| ||||| ||| | || |||| | ||| |||| || || Sbjct 496906 CAGCAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGACTAC 496965 Query 115463 AACATTCAAAAAGAGTCTACTATACAT 115489 || ||||| ||||||||||| ||||| Sbjct 496966 AATATTCAGAAAGAGTCTACCTTACAT 496992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425327696697400