Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 7e-13 >seq4 Length=66470942 Score = 89.7 bits (98), Expect = 7e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286 ||||| || || | |||| ||| |||| |||| | || | | ||| |||||||| ||| Sbjct 4387791 CCTCCTTGGTCAACATATCGAGCAGTGTCATTAAACACACGTAGCATCGGAATAATTCCA 4387850 Query 63287 TTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63346 || ||||| ||||| || || ||||| || ||| || |||||||||| | ||| Sbjct 4387851 TTTGATGTCCCATTTGTTCCACGAATATAACTCCCAGTGCCACGAATATTGTGCACAGAT 4387910 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 | || ||||| || || ||| || | || || || | || ||||| ||| Sbjct 4387911 ACTCCAATTCCTCCAGCAGATTTGCTAATAACAGCACACTCCTTAAGAGTGTCATATATG 4387970 Query 63407 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 63448 ||||| ||||||||||| ||||| | || || |||||| Sbjct 4387971 CCCTCAATACTATCATCTTTCATGCATATCAGGAAGCAGCTA 4388012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633607090342000