Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=98543444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 ||||| |||||||| | ||| | || | | || ||| |||||||| || || || Sbjct 96676802 ACCAGAGACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTGAATGGCAC 96676861 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 |||||||||||| || | || | |||||||| ||||||||| ||||| || | ||||| Sbjct 96676862 TCCCAAACCCATATCGGCAGATCGCTGATACATCTGACAGGATAGCTCCCCATTGGCTAC 96676921 Query 20359 ATAAAA 20364 |||||| Sbjct 96676922 ATAAAA 96676927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441355448531800