Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 2e-11 >seq10 Length=65527505 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| || |||| || ||| |||||||| || ||||||||||| |||||||| || Sbjct 1071580 ACCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGC 1071639 Query 33960 CAATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || |||| | | || ||||| |||||||| ||||| |||| | ||||| || | Sbjct 1071640 TAA-TGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTG 1071698 Query 34019 GCACGCTCTCTTTGTCCATAATTTT 34043 | | | |||||||||| ||| || Sbjct 1071699 GGATACCCTCTTTGTCCTGAATCTT 1071723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397047180722290