Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 7e-11 >seq3 Length=70787664 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 136979 AATGGACATTGCAGGTCTCGAACCTGCGACCGTTCG-GTTATGAGCCGAATGCTCTGACC 137037 ||||| | |||||||||||||||||||||| |||| ||||| ||| || ||||| ||| Sbjct 6322261 AATGGCCCATGCAGGTCTCGAACCTGCGACC-TTCGCGTTATTAGCACAACGCTCTAACC 6322319 Query 137038 AACTGAGCTAAACGTCCTTAAT 137059 ||||||||||| | ||||||| Sbjct 6322320 AACTGAGCTAATGGGCCTTAAT 6322341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454484532374400