Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq3145 598 1e-166 seq2 331 3e-86 seq5 192 2e-44 seq1 188 2e-43 seq11 122 3e-23 seq12 113 1e-20 seq3 107 6e-19 seq2662 100 9e-17 seq364 95.1 4e-15 >seq3145 Length=155461 Score = 598 bits (662), Expect = 1e-166 Identities = 727/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 564 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 623 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310 ||| |||||||| | || ||| ||||||||| || | | ||| | |||||| || Sbjct 624 GTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTAC 683 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370 || || ||||| || || || || || || |||||||||||| ||| || | || ||| Sbjct 684 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 743 Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430 || ||| || | || || ||||||| ||| |||||||| ||||| ||| ||||| Sbjct 744 AAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTT 803 Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490 || |||||||| |||||||| | || ||||| || |||||||| || || || ||||| Sbjct 804 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 863 Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 864 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 923 Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610 | || | |||||| || | |||||||||||| ||| | | || ||||| Sbjct 924 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 983 Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670 ||||||||| || || | |||||| || || ||||||||||| |||||||| |||||||| Sbjct 984 TACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAA 1043 Query 5671 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730 ||| | ||| || || |||||||||||||| || ||||||||||||||| |||||||| Sbjct 1044 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 1103 Query 5731 CTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790 || |||| ||||| | || || |||| | || || ||||| || ||||||||||| Sbjct 1104 TTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 1163 Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850 || |||||| |||||||| || | | | | ||||| ||||| | || |||| ||| Sbjct 1164 AACAGCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCATGTA 1223 Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910 | || | |||| | |||||| | || | |||| || || || || ||||| | Sbjct 1224 ACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 1283 Query 5911 CCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG 5968 ||||||||| | ||| || ||||||||||| || || || ||||| || || || Sbjct 1284 CCATTCATCAACGGAT--GCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCA 1341 Query 5969 GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACG 6028 || | || | || ||| || || || ||||||||||| || |||||||| |||| || Sbjct 1342 GAAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGAAACA 1401 Query 6029 GGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCA 6088 |||||||| || || || ||||| ||||| || ||||| | ||| || | |||||| || Sbjct 1402 GGTTCACGAATACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA 1461 Query 6089 GTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGG 6148 | |||||| || || | | || ||||| || ||||||||||| || | || || ||| Sbjct 1462 GAAGTTGCCGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGG 1521 Query 6149 TTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || | |||||||| | ||||| |||||| Sbjct 1522 TTTTCAGTGCTAGTTATCCAGTTACAGAA 1550 >seq2 Length=55340444 Score = 331 bits (366), Expect = 3e-86 Identities = 650/949 (68%), Gaps = 18/949 (2%) Strand=Plus/Plus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| | |||||| ||||| ||||| |||| ||||| ||| Sbjct 13823761 AGCAGCTAGGTCTAGAGGGAAGTTATTAGCATTCCGTTCATGCATAACTTTCATACTAAG 13823820 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTAC--CGCT-AGAGTCAAC 5307 ||| |||||||| | || ||| ||||||||| |||| || | || | |||| Sbjct 13823821 GTTAGCACGGTTGATGATATCAGCCCAAGTGTT---GATTACACGACACTGACTATCAAG 13823877 Query 5308 GACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGA 5367 || || || ||||| || || | || || || |||||||||||| ||| || | || Sbjct 13823878 TACAGATTGGTTGAAATTGAAACAATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGC 13823937 Query 5368 GGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATT 5427 ||||| ||| || | | || |||| || || | |||||| ||||| ||| || Sbjct 13823938 GGTAAACCAGATACCTAATACAGGCCTAGCGGCTAAGAAGAAGTGTAACGAACGAGATTT 13823997 Query 5428 GTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTT 5487 ||| || |||||||| || ||||| | | ||||| | |||||||| | ||||| || Sbjct 13823998 GTTGAAACTAGCATATTGAAAGATCAATAGGCCAAAACAACCATGAGCGTCTACAATATT 13824057 Query 5488 ATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGT 5547 ||| |||||||||||||| | |||| | || | | || ||| | | | || Sbjct 13824058 ATAAGTTTCTTCCTCTTGACTGAATCTTTAACATTTATTGGCAGATTCATTTTCTATGGT 13824117 Query 5548 TTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACC 5607 ||| | || | |||||| |||| | |||| | | ||| || | | || | Sbjct 13824118 TTCCCTGATCAAACTAGAAGTTACAAAGTTACCATACGTGGCACTAAATAGTGAGCCGTC 13824177 Query 5608 GAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 5667 |||||||| ||| || || | |||||| || || ||||||||||| |||| ||| ||||| Sbjct 13824178 GAATACCCTAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTATTCGGCCTG 13824237 Query 5668 GAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACT 5727 |||||| | ||| || || ||||| | |||||| || ||||||||||||||| || | Sbjct 13824238 GAATACAATCATGAAATTGAAAGTGCAAGAGATTCCTAGAGGCATACCATCAGAAAAGTT 13824297 Query 5728 TCCCTGTCCGAAAGGGT--ATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAA 5785 | | || |||| |||| ||| ||||| || ||| || | ||| || ||| || Sbjct 13824298 TGCTTGACCGATTGGGTAGATAAGGAAAATTGTG-GTA-GCAGATCTAACAGGAGCTTAA 13824355 Query 5786 TATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCC 5845 ||||| || |||||| |||| ||| |||| | | | ||||| ||||| | || ||| Sbjct 13824356 TATGCAACAACAATCCAAGGTCTCATACCTAGACGGAAGCTAAGCTCCCAATCACGACCC 13824415 Query 5846 AAGTAAGCTGCGATA--CCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCAT 5903 |||| | | |||| |||| || |||||| | | | |||| || || | | Sbjct 13824416 TTGTAA-CAG-GATACGCCAAGAAAGAAGTGTAGAAAAATTAGTTCATAATAACCATCGT 13824473 Query 5904 TGTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAAT 5961 |||| | |||||||| | ||| || || ||| | || || || || ||||| || || Sbjct 13824474 TGTATAACCATTCATAAATGGAT--GCCGCATCCTAAATTGGGTAAAAATGTAAACCTAT 13824531 Query 5962 TGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCC 6021 || || | || | || || || || || ||||||||| | || |||||| | | Sbjct 13824532 AGCTGCAGAAGTAGGAATAATCGCACCGGAAATAATGTTGTTTTCGTAAAGTAGAAACCT 13824591 Query 6022 TGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATAT 6081 || | |||||||| || || || ||||| |||| ||| | | ||| || | || Sbjct 13824592 TGAAAAAGGTTCACGAATACCATCAATGTCTGCTGGACAAGCATCAATGAAGGCAATAAT 13824651 Query 6082 AAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAAC 6130 |||| ||| |||||| || || | | | ||||| || || |||||| Sbjct 13824652 AAATACAGAAGTTGCCGTCAATAAGGTATGGATCATGAAAACCCCAAAC 13824700 Score = 113 bits (124), Expect = 1e-20 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 5228 TCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACG 5287 || ||||| ||||||||||||||||| |||||||| | || ||| ||||||||| || Sbjct 22404922 TCTTGCATAACTTCCATACCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATT 22404981 Query 5288 ATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCC 5347 | | ||| | |||||| || || || ||||| || || || || || || |||||| Sbjct 22404982 ACACGACCCTGACTGTCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCC 22405041 Query 5348 ATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGT 5397 |||||| ||| || | || ||||| ||| || | || || |||||||| Sbjct 22405042 ATAGTGCTGATACCTAAAGCGGTAAACCAGATACCTACTACAGGCCAAGT 22405091 >seq5 Length=65875088 Score = 192 bits (212), Expect = 2e-44 Identities = 283/399 (71%), Gaps = 4/399 (1%) Strand=Plus/Plus Query 5765 GCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAA 5824 || || ||||| || ||||||||||| || |||||| |||||||| || | | | | Sbjct 14606152 GCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATACCCAGACAGAAG 14606211 Query 5825 CTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACG 5884 ||||| ||||| | | |||| |||| || | |||| | ||||| | || | Sbjct 14606212 CTAAGCTCCCACTCATGACCCATGTAACAAGCTACGCCAAGTAATAAGTGTAGAACAATT 14606271 Query 5885 AGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGG 5942 |||| || || || || ||||| | ||||||||| | ||| || |||||||| || | Sbjct 14606272 AGTTCATAAGGACCACCGTTGTATAACCATTCATCAACTGAT--GCCGCTTCCCACATTG 14606329 Query 5943 GATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGT 6002 | || || ||||| || || || || | || | || ||| || || || ||||||| Sbjct 14606330 GGTAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCGGAAATAATGTTGT 14606389 Query 6003 TTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTG 6062 |||| || |||||||| |||| || |||||||| || || || ||||| ||||| || | Sbjct 14606390 TTCCGTAAAGTAGAGACCCTGAAACAGGTTCACGAATACCATCAATGTCTACTGGAGGAG 14606449 Query 6063 CAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGA 6122 |||| | ||| || | |||||| ||| |||||| || || | | || ||||| || | Sbjct 14606450 CAGCAATGAAGGCAATAATAAATACAGAAGTTGCCGTCAATAAGGTAGGGATCATCAAAA 14606509 Query 6123 CACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAG 6161 |||||||||| || | || || | ||| | ||||||| Sbjct 14606510 CACCAAACCATCCAATGTAAAGACAGTTTTCAGTGCTAG 14606548 >seq1 Length=98543444 Score = 188 bits (208), Expect = 2e-43 Identities = 191/249 (77%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 5603 CCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCT 5662 || |||||||||||||| || || | |||||| || || ||||||||||| |||||||| Sbjct 45009700 CCGCCGAATACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATCTTGTGTTCA 45009641 Query 5663 GCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTG 5722 ||||||||||| | ||| || || |||||| |||||| || ||||||||||||||| Sbjct 45009640 GCCTGGAATACAATCATGAAATTGGAAGTACTAGAGATTCCTAGAGGCATACCATCATAA 45009581 Query 5723 AAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCT 5782 |||||||| || |||| |||| | || || |||| | || || ||||| || ||| Sbjct 45009580 AAACTTCCTTGACCGATTGGGTGGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCT 45009521 Query 5783 GAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGT 5842 |||||||| || |||||| |||||||| || | | | | ||||| ||||| | || Sbjct 45009520 GAATATGCAACAGCAATCCAAGGTCGCATACCAAGACGGAAGCTAAGCTCCCACTCACGA 45009461 Query 5843 CCCAAGTAA 5851 |||| |||| Sbjct 45009460 CCCATGTAA 45009452 Score = 109 bits (120), Expect = 2e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 5225 CGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGA 5284 ||||| ||||| ||||||||||||||| | |||||||| | || ||| ||||||||| | Sbjct 88349403 CGTTCATGCATAACTTCCATACCAAGGCTAGCACGGTTGATGATATCGGCCCAAGTGTTA 88349344 Query 5285 A--CGATTCTACCG-CTAGAGTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTA 5341 | || || | ||| ||||| || || || ||||| || || || || || || Sbjct 88349343 ATTACATGACACTGACTA---TCAACTACAGATTGGTTGAAATTGAAACCATTCAGGTTG 88349287 Query 5342 AAAGCCATAGTGGAGATTCCCATAGAGGTAAGCC--ATATGCAAACGACGGGCCAAGTAG 5399 |||||||||||| ||| || | || ||||| || |||| | || || ||||||| || Sbjct 88349286 AAAGCCATAGTGCTGATACCTAAAGCGGTAAACCAGATATACCTACTACAGGCCAAGCAG 88349227 Query 5400 CCAGGAAGAAATGTAA 5415 | |||||| ||||| Sbjct 88349226 CTCAGAAGAAGTGTAA 88349211 >seq11 Length=56302525 Score = 122 bits (134), Expect = 3e-23 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 5585 ATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGC 5644 |||||| ||| | | || || ||||||| ||| || || | ||| || || | ||| Sbjct 7156431 ATAGCACTGAATAGGGAGCCGCCAAATACCCTAGCTACGCCTAACATATGAAATGAGTGC 7156372 Query 5645 ATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCA 5704 |||||||| |||||||| ||||||||||| | ||| || || ||||||||||||| || Sbjct 7156371 ATAAGGATGTTGTGTTCAGCCTGGAATACAATCATGAAATTGAAAGTACCAGAGACTCCT 7156312 Query 5705 AGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGT 5744 ||||||||||||| | |||||||| || |||| |||| Sbjct 7156311 AGAGGCATACCATTAGAAAAACTTCCTTGACCGATTGGGT 7156272 Score = 82.4 bits (90), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 5239 TTCCATACCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCT 5298 ||||||||||||||| |||||||| | || ||| ||||||||| || | | ||| Sbjct 9104210 TTCCATACCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTG 9104269 Query 5299 AGAGTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGAT 5358 | |||||| || || || ||||| || || || || || || |||||||||||| ||| Sbjct 9104270 ACTGTCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGAT 9104329 Query 5359 TCC 5361 || Sbjct 9104330 ACC 9104332 >seq12 Length=67145203 Score = 113 bits (124), Expect = 1e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 5688 AAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATA 5747 ||||||||||||| || ||||||||||||||| |||||||| || |||| ||||| | Sbjct 45738266 AAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGA 45738325 Query 5748 CTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTC 5807 || || |||| | || || |||| || ||||||||||| || |||||| |||| Sbjct 45738326 TCAAGAAAACTGCGGTAGCAGCTACAACAGGAGCTGAATATGCAACAGCAATCCAAGGTC 45738385 Query 5808 GCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAA 5867 |||| || | | | | ||||| ||||| | | |||| |||| || | ||||| | Sbjct 45738386 GCATACCCAGACGGAAGCTAAGCTCCCACTCATGACCCATGTAACAAGCTACGCCAATTA 45738445 Query 5868 GGAAGTG 5874 |||||| Sbjct 45738446 AGAAGTG 45738452 Score = 93.3 bits (102), Expect = 1e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| |||||| | ||||| ||||| ||||| |||||||| Sbjct 54273908 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCAATACGTTCATGCATAACTTCAATACCAAG 54273849 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTG 5281 ||| | |||||| | || ||| ||||||||| Sbjct 54273848 GTTAGAACGGTTGATGATATCAGCCCAAGTG 54273818 >seq3 Length=70787664 Score = 107 bits (118), Expect = 6e-19 Identities = 128/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 ||| |||| || || |||||||| |||||||| ||||| ||||| | ||||||||||||| Sbjct 48907106 GCTCCTAG-TCTAGAGGGAAGTTATGAGCATTGCGTTCATGCATAAATTCCATACCAAGG 48907164 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAA-CGATTCTACCGCTAGAGTCAACGAC 5310 || |||||||| | || ||| |||||||| || | | ||| | |||||| | Sbjct 48907165 TTAGCACGGTTGATGATATCAGCCCAAGTTTTAATTTACACGACCCTGACTGTCAACTAT 48907224 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCC 5361 || || ||||| || || || || || || |||||||||||| ||| || Sbjct 48907225 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACC 48907275 >seq2662 Length=2183 Score = 100 bits (110), Expect = 9e-17 Identities = 170/246 (69%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 5932 TTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGA 5991 ||||||||| || | || ||||| || || || || | || | || | | || | Sbjct 871 TTCCCAGATTGGGTGAAAATGTAAACCTATAGCTGCAGAAGTTGGAATAATGACACCGGT 930 Query 5992 TATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTC 6051 || ||||||||| | || |||||||| | | || ||||||| || || || |||| Sbjct 931 AATAATGTTGTTTTCGTAAAGTAGAGACCGTCAAACAAGTTCACGAATACCATCAGTGTC 990 Query 6052 GACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGG 6111 ||| || ||||| | ||| || | |||||| || |||||| || || | | || Sbjct 991 ---TGGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTTGCCGTCAATAAGGTAGG 1047 Query 6112 TATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTC 6171 ||||| || ||||||||||| || | || || ||||| | ||||||| | ||||| Sbjct 1048 GATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAATGCTAGTTATCCAGTT 1107 Query 6172 ACAGAA 6177 |||||| Sbjct 1108 ACAGAA 1113 >seq364 Length=5030 Score = 95.1 bits (104), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 5932 TTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGA 5991 ||||||||| || | || ||||| || || || || | || | || ||| | || Sbjct 3595 TTCCCAGATTGGGCAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCACAGGA 3536 Query 5992 TATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTC 6051 || |||| |||||| || |||||||| | | | ||||||| || || || ||||| Sbjct 3535 AATAATGTCGTTTCCGTAAAGTAGAGACCGTCAAAAAAGTTCACGAATACCATCAATGTC 3476 Query 6052 GACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGG 6111 ||| || ||||| | ||| || | |||||| ||| |||||| || || | | || Sbjct 3475 ---TGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTGCCGTCAATAAGGTAGG 3419 Query 6112 TATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGT 6162 ||||| || ||||||||||| || | || || ||||| | ||||||| Sbjct 3418 GATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAATGCTAGT 3368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152643899014470