Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_019932.1
Length=29564
Score E
Sequences producing significant alignments: (Bits) Value
seq1141 379 4e-101
>seq1141
Length=3271
Score = 379 bits (420), Expect = 4e-101
Identities = 556/777 (72%), Gaps = 12/777 (2%)
Strand=Plus/Plus
Query 10946 CGTATCCGCAACATCCTGAAGTCGCGCCAGATAGGTGCCACGTTCTACTTTGCCCGCGAG 11005
||||||||||| | |||||| |||||||| |||||||||| || || || || |||
Sbjct 2459 CGTATCCGCAATGTTCTGAAGAGCCGCCAGATCGGTGCCACGTGGTATTTCGCACGGGAG 2518
Query 11006 GCGCTGATTGACGCGCTGACCACCGGGCGCAACCAGATATTTTTGTCGGCCAGCAAGGCG 11065
|| | ||||| ||| ||||||| |||||||| ||||| || ||||||||||||||||||
Sbjct 2519 GCCTTCATTGATGCGTTGACCACGGGGCGCAATCAGATTTTCTTGTCGGCCAGCAAGGCG 2578
Query 11066 CAGGCGCACGTCTTTAAAAACTACATCATTGACTTTGCCCGCCAGG-TG--GACGTTGAC 11122
||||| ||||| || || | |||||||| | || || | | || | ||| ||
Sbjct 2579 CAGGCCCACGTTTTCAAGCAATACATCATCCAGTTCGCGAAGGATGCTGCCGGCGTGGAG 2638
Query 11123 CTGAAGGGCGACCCGATTGTGCTGCCGAACGGTGCCCGCCTGATTTTTCTTGGCACCAAC 11182
||||||||||| ||||| ||| |||||||||| || ||| ||| || ||||| |||
Sbjct 2639 CTGAAGGGCGAGCCGATGGTGTTGCCGAACGGCGCGACGCTGTATTTCCTCGGCACAAAC 2698
Query 11183 GTGCGCACCGCGCAGAGCTACACCGGCAACCTGTATCTCGATGAATATTTCTGGATACCG 11242
| ||||||||||||||||| ||||||||| ||||| || || || |||||||| | |
Sbjct 2699 GCACGCACCGCGCAGAGCTATCACGGCAACCTCTATCTGGACGAGTACTTCTGGATCCAG 2758
Query 11243 AAATTCCAGGAGCTGCGAAAGGTCGCCAGCGGCATGTCGCTGCATAAAAAGTGGCGCACC 11302
||||| |||||||| ||||| ||| ||| ||| | | || ||||||||
Sbjct 2759 CGCTTCCAAGAGCTGCGCAAGGTGGCCTCCGGGATGGCCATCCACTCGAAGTGGCGGCAG 2818
Query 11303 ACCTACTTTTCCACGCCGTCGAGCCTGTCGCACTCCGCTTATCCGTTCTGGTCGGGCGAG 11362
|| || || || ||||| |||||||| | ||| || || ||||||||||| |||| |
Sbjct 2819 ACTTATTTCTCGACGCCTTCGAGCCTTGCCCACGAAGCGTACCCGTTCTGGTCTGGCGCG 2878
Query 11363 CTGTTCAACAAAGGGCGGCGCAGCAAAGCCGATCGCATCGAAATCGACCTGTCGCATACG 11422
|||||||| |||||| | || | || | |||| | ||| ||| |||
Sbjct 2879 CTGTTCAATCGCGGGCGG---AAGAAGGAAGACCACATCCGCGTTGAC--GTCAGCCACG 2933
Query 11423 C-ACCTGGCA-AAAGGCGCGCTGTGCGGTGACGGCCAGTGGCGGCAGATTGTGACGGTTG 11480
| | || ||| | ||| || ||||| ||||| |||||| |||||||| ||||| |
Sbjct 2934 CGAACTTGCAGGACGGCCGGCGGTGCGCGGACGGTCAGTGGAAACAGATTGTCACGGTGG 2993
Query 11481 AGGATGCGCTGACCGGCGGCTGTAACCTGTTTGACCTCGACCAGCTCCAGCTGGAATACA 11540
| || || | |||| ||||| |||||||| |||||||||||| | | |||||| ||||
Sbjct 2994 AAGACGCCATCGCCGGTGGCTGCAACCTGTTCGACCTCGACCAGTTGCGGCTGGAGTACA 3053
Query 11541 GCCCGTCGGAATACCAGAACCTGCTGATGTGTGAGTTTGTGGACGATGAGGCGAGCGTGT 11600
|| |||| | | |||||||||||||||| | || | || || ||| || |
Sbjct 3054 GCGATGCGGACTTCGAGAACCTGCTGATGTGCGGCTTCATCGATGACACGGCCTCTGTCT 3113
Query 11601 TCCCGTTCGCCGA-GCTGCAGACCTGCATGATCGACAGCCTGGAGGAATGGAGCGACTTT 11659
||||| | | ||| ||| | | ||||| |||||||| ||||| ||| |||||
Sbjct 3114 TCCCGCT-GTCGATGCTCATGCGCGGCATGGTCGACAGCTGGGAGGTGTGGGAGGACTTC 3172
Query 11660 AACCCGTACCTGCCGCGCCCGTTTGATTACCGCCCGGTCTGGATTGGCTACGACCCG 11716
|| | ||| ||||| || | | | || ||| ||| | ||||||||||||
Sbjct 3173 CGCCATTGGTCGCCCCGCCCTTTCGGTAATCGTGAGGTATGGGTGGGCTACGACCCG 3229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94479671347740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |