Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq1141 379 4e-101 >seq1141 Length=3271 Score = 379 bits (420), Expect = 4e-101 Identities = 556/777 (72%), Gaps = 12/777 (2%) Strand=Plus/Plus Query 10946 CGTATCCGCAACATCCTGAAGTCGCGCCAGATAGGTGCCACGTTCTACTTTGCCCGCGAG 11005 ||||||||||| | |||||| |||||||| |||||||||| || || || || ||| Sbjct 2459 CGTATCCGCAATGTTCTGAAGAGCCGCCAGATCGGTGCCACGTGGTATTTCGCACGGGAG 2518 Query 11006 GCGCTGATTGACGCGCTGACCACCGGGCGCAACCAGATATTTTTGTCGGCCAGCAAGGCG 11065 || | ||||| ||| ||||||| |||||||| ||||| || |||||||||||||||||| Sbjct 2519 GCCTTCATTGATGCGTTGACCACGGGGCGCAATCAGATTTTCTTGTCGGCCAGCAAGGCG 2578 Query 11066 CAGGCGCACGTCTTTAAAAACTACATCATTGACTTTGCCCGCCAGG-TG--GACGTTGAC 11122 ||||| ||||| || || | |||||||| | || || | | || | ||| || Sbjct 2579 CAGGCCCACGTTTTCAAGCAATACATCATCCAGTTCGCGAAGGATGCTGCCGGCGTGGAG 2638 Query 11123 CTGAAGGGCGACCCGATTGTGCTGCCGAACGGTGCCCGCCTGATTTTTCTTGGCACCAAC 11182 ||||||||||| ||||| ||| |||||||||| || ||| ||| || ||||| ||| Sbjct 2639 CTGAAGGGCGAGCCGATGGTGTTGCCGAACGGCGCGACGCTGTATTTCCTCGGCACAAAC 2698 Query 11183 GTGCGCACCGCGCAGAGCTACACCGGCAACCTGTATCTCGATGAATATTTCTGGATACCG 11242 | ||||||||||||||||| ||||||||| ||||| || || || |||||||| | | Sbjct 2699 GCACGCACCGCGCAGAGCTATCACGGCAACCTCTATCTGGACGAGTACTTCTGGATCCAG 2758 Query 11243 AAATTCCAGGAGCTGCGAAAGGTCGCCAGCGGCATGTCGCTGCATAAAAAGTGGCGCACC 11302 ||||| |||||||| ||||| ||| ||| ||| | | || |||||||| Sbjct 2759 CGCTTCCAAGAGCTGCGCAAGGTGGCCTCCGGGATGGCCATCCACTCGAAGTGGCGGCAG 2818 Query 11303 ACCTACTTTTCCACGCCGTCGAGCCTGTCGCACTCCGCTTATCCGTTCTGGTCGGGCGAG 11362 || || || || ||||| |||||||| | ||| || || ||||||||||| |||| | Sbjct 2819 ACTTATTTCTCGACGCCTTCGAGCCTTGCCCACGAAGCGTACCCGTTCTGGTCTGGCGCG 2878 Query 11363 CTGTTCAACAAAGGGCGGCGCAGCAAAGCCGATCGCATCGAAATCGACCTGTCGCATACG 11422 |||||||| |||||| | || | || | |||| | ||| ||| ||| Sbjct 2879 CTGTTCAATCGCGGGCGG---AAGAAGGAAGACCACATCCGCGTTGAC--GTCAGCCACG 2933 Query 11423 C-ACCTGGCA-AAAGGCGCGCTGTGCGGTGACGGCCAGTGGCGGCAGATTGTGACGGTTG 11480 | | || ||| | ||| || ||||| ||||| |||||| |||||||| ||||| | Sbjct 2934 CGAACTTGCAGGACGGCCGGCGGTGCGCGGACGGTCAGTGGAAACAGATTGTCACGGTGG 2993 Query 11481 AGGATGCGCTGACCGGCGGCTGTAACCTGTTTGACCTCGACCAGCTCCAGCTGGAATACA 11540 | || || | |||| ||||| |||||||| |||||||||||| | | |||||| |||| Sbjct 2994 AAGACGCCATCGCCGGTGGCTGCAACCTGTTCGACCTCGACCAGTTGCGGCTGGAGTACA 3053 Query 11541 GCCCGTCGGAATACCAGAACCTGCTGATGTGTGAGTTTGTGGACGATGAGGCGAGCGTGT 11600 || |||| | | |||||||||||||||| | || | || || ||| || | Sbjct 3054 GCGATGCGGACTTCGAGAACCTGCTGATGTGCGGCTTCATCGATGACACGGCCTCTGTCT 3113 Query 11601 TCCCGTTCGCCGA-GCTGCAGACCTGCATGATCGACAGCCTGGAGGAATGGAGCGACTTT 11659 ||||| | | ||| ||| | | ||||| |||||||| ||||| ||| ||||| Sbjct 3114 TCCCGCT-GTCGATGCTCATGCGCGGCATGGTCGACAGCTGGGAGGTGTGGGAGGACTTC 3172 Query 11660 AACCCGTACCTGCCGCGCCCGTTTGATTACCGCCCGGTCTGGATTGGCTACGACCCG 11716 || | ||| ||||| || | | | || ||| ||| | |||||||||||| Sbjct 3173 CGCCATTGGTCGCCCCGCCCTTTCGGTAATCGTGAGGTATGGGTGGGCTACGACCCG 3229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94479671347740