Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq10 95.1 1e-14
seq11 84.2 2e-11
>seq10
Length=65527505
Score = 95.1 bits (104), Expect = 1e-14
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
||||| |||||||| || ||||| || ||||||||||||||| || ||| |||| |||
Sbjct 463913 GATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAAGATGGTAGAACCCTGGCTGAT 463854
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCAC 28757
|| |||||||| |||||||| ||||| |||
Sbjct 463853 TACAACATTCAGAAAGAATCAACTCTTCAC 463824
>seq11
Length=56302525
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||||||||| || ||||| || || || || ||||| || || ||||
Sbjct 497017 ATGCAAATATTTGTCAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCA 497076
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || | || ||| || ||||| ||||| | || ||| ||
Sbjct 497077 GATACTATCGACAATGTTAAAGCAAAGATACAAGACAAGGAGGGTATTCCTCCAGACCAG 497136
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|||||| | |||||||| || || ||| | || ||| | || |||| ||||| |||
Sbjct 497137 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAAC 497196
Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757
||||| |||||||| || ||||||
Sbjct 497197 ATTCAGAAAGAATCAACCCTGCAC 497220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425388494366955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |