Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 1e-14 seq11 84.2 2e-11 >seq10 Length=65527505 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 ||||| |||||||| || ||||| || ||||||||||||||| || ||| |||| ||| Sbjct 463913 GATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAAGATGGTAGAACCCTGGCTGAT 463854 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCAC 28757 || |||||||| |||||||| ||||| ||| Sbjct 463853 TACAACATTCAGAAAGAATCAACTCTTCAC 463824 >seq11 Length=56302525 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||||| || || || || ||||| || || |||| Sbjct 497017 ATGCAAATATTTGTCAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCA 497076 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || ||| || ||||| ||||| | || ||| || Sbjct 497077 GATACTATCGACAATGTTAAAGCAAAGATACAAGACAAGGAGGGTATTCCTCCAGACCAG 497136 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || ||| | || ||| | || |||| ||||| ||| Sbjct 497137 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAAC 497196 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||||| || |||||| Sbjct 497197 ATTCAGAAAGAATCAACCCTGCAC 497220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425388494366955