Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_020835.1
Length=47325
Score E
Sequences producing significant alignments: (Bits) Value
seq3145 574 1e-159
seq2 354 2e-93
seq5 228 2e-55
seq1 174 5e-39
seq11 122 3e-23
seq364 105 2e-18
seq2662 100 9e-17
seq12 98.7 3e-16
seq7 86.0 2e-12
>seq3145
Length=155461
Score = 574 bits (636), Expect = 1e-159
Identities = 728/993 (73%), Gaps = 6/993 (1%)
Strand=Plus/Plus
Query 17828 GATTGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCC 17887
||| | ||||| ||||| |||||||||||||||||||| || ||||||||||| | ||
Sbjct 561 GATAGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACC 620
Query 17888 AAGGTTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTG-CTA 17946
||||||||| | ||||| | |||||||| || | || | || | ||| | |
Sbjct 621 AAGGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGA-CTGTCAA 679
Query 17947 CAATGGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAG 18006
| | ||||||||||| ||||| ||||| || || |||||||||||| ||| || | ||
Sbjct 680 CTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAG 739
Query 18007 AGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTA- 18065
||||| ||| || | || ||||||||||| | |||||| |||| || | |
Sbjct 740 CGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTA-ACGAACGAGAG 798
Query 18066 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATA 18125
||||| || |||||||| |||||||| | || ||||| || |||||||| || || |||
Sbjct 799 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 858
Query 18126 TTATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTC 18185
||||| || ||||| ||||| || ||| | || || | || ||| ||| || ||
Sbjct 859 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 918
Query 18186 GTTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 18245
||||| || || | ||||| || | || ||||||||| ||||| | ||
Sbjct 919 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 978
Query 18246 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCT 18305
||||||||||| || || || | ||| || || || ||||||||||| |||||||| ||
Sbjct 979 CCGAATACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCC 1038
Query 18306 TGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAA 18365
|||||||| | |||||||||||||||||| || || ||||||||||||||||| |||
Sbjct 1039 TGGAATACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAA 1098
Query 18366 CTCCCTTGTCCAAAAGGATA-AACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGA 18424
|| ||||| || | || || | | ||||| |||| | |||||||| || || || ||
Sbjct 1099 CTTCCTTGACCGATTGGGTAGATCAAGAAA-ACTGCGGTAGCAGCTGCAACAGGAGCTGA 1157
Query 18425 ATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCC 18484
||| |||||| |||||| || |||||||| || | | ||||| ||||| | || ||
Sbjct 1158 ATATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACC 1217
Query 18485 CATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT 18544
||||||| || | ||| | | ||||| | ||||| |||| ||| || || |||||
Sbjct 1218 CATGTAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1277
Query 18545 ATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 18604
|||||||| || || | || ||| ||||||||||||||||| || || | ||| || ||
Sbjct 1278 GTATAACCATTCATCAACGGATGCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGC 1337
Query 18605 GTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGA 18664
||| | || | || || || || || ||||||||||| || |||| | |||||
Sbjct 1338 TGCAGAAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGA 1397
Query 18665 GACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAA 18724
||||| |||||||||||||| ||||| || ||||||||||||| || ||||| | |||
Sbjct 1398 AACAGGTTCACGAATACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAA 1457
Query 18725 TGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAG 18784
| | | || ||| || || | | ||||||||| | || |||||||| || | ||| ||
Sbjct 1458 TACAGAAGTTGCCGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1517
Query 18785 GCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817
||||| | || || || | ||||| ||| ||
Sbjct 1518 ACGGTTTTCAGTGCTAGTTATCCAGTTACAGAA 1550
>seq2
Length=55340444
Score = 354 bits (392), Expect = 2e-93
Identities = 654/951 (69%), Gaps = 16/951 (2%)
Strand=Plus/Plus
Query 17828 GATTGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCC 17887
||| | ||||| ||||| |||||||||| |||||| || || |||||||||| | |
Sbjct 13823758 GATAGCAGCTAGGTCTAGAGGGAAGTTATTAGCATTCCGTTCATGCATAACTTTCATACT 13823817
Query 17888 AAGGTTAGCTCTGTTGAGTACGTCAGCCCA--TGTAGGT---ACGACT-TGTCC-TCCAG 17940
||||||||| | ||||| | |||||||| ||| | | ||||| || | || ||
Sbjct 13823818 AAGGTTAGCACGGTTGATGATATCAGCCCAAGTGTTGATTACACGACACTGACTATCAAG 13823877
Query 17941 CTGCTACAATGGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTC 18000
|||| ||||||||||| ||||| | ||| || || |||||||||||| ||| |
Sbjct 13823878 ----TACA---GATTGGTTGAAATTGAAACAATTTAGGTTGAAAGCCATAGTGCTGATAC 13823930
Query 18001 CCATAGAGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCC 18060
| | || ||||| ||| || | || |||| ||| || |||||||| |||| ||
Sbjct 13823931 CTAAAGCGGTAAACCAGATACCTAATACAGGCCTAGCGGCTAAGAAGAAGTGTA-ACGAA 13823989
Query 18061 TGCTATT-GTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCA 18119
| ||| ||| || |||||||| || ||||| | | ||||| | |||||||| |
Sbjct 13823990 CGAGATTTGTTGAAACTAGCATATTGAAAGATCAATAGGCCAAAACAACCATGAGCGTCT 13824049
Query 18120 ACAATATTATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGC 18179
||||||||||| || ||||| ||||| | ||| | || | | || ||| |||
Sbjct 13824050 ACAATATTATAAGTTTCTTCCTCTTGACTGAATCTTTAACATTTATTGGCAGATTCATTT 13824109
Query 18180 TCAGTCGTTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAA 18239
|| | ||||| || || | ||||| |||| | || | | | ||| ||||
Sbjct 13824110 TCTATGGTTTCCCTGATCAAACTAGAAGTTACAAAGTTACCATACGTGGCACTAAATAGT 13824169
Query 18240 GCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGT 18299
| || ||||||||| || || || | ||| || || || ||||||||||| |||| |
Sbjct 13824170 GAGCCGTCGAATACCCTAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTAT 13824229
Query 18300 TCGGCTTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCA 18359
||||| |||||||| | ||||||||||||||| | || || |||||||||||||||
Sbjct 13824230 TCGGCCTGGAATACAATCATGAAATTGAAAGTGCAAGAGATTCCTAGAGGCATACCATCA 13824289
Query 18360 GAGAAACTCCCTTGTCCAAAAGGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGGT 18419
|| || | |||| || | || || | || || | || | |||| | || ||
Sbjct 13824290 GAAAAGTTTGCTTGACCGATTGGGTAGATAAGGAAAATTGTGGTAGCAGATCTAACAGGA 13824349
Query 18420 GCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGT 18479
|| |||| |||||| |||||| || | ||||||||| | | ||||| ||||| |
Sbjct 13824350 GCTTAATATGCAACAACAATCCAAGGTCTCATACCTAGACGGAAGCTAAGCTCCCAATCA 13824409
Query 18480 CGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCT 18539
|| ||| ||||| | | ||| | | ||||| | | ||| |||| ||| ||
Sbjct 13824410 CGACCCTTGTAACAGGATACGCCAAGAAAGAAGTGTAGAAAAATTAGTTCATAATAACCA 13824469
Query 18540 CCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 18599
|||| |||||||| || | | || ||| || ||| | |||||||| || || | |||
Sbjct 13824470 TCGTTGTATAACCATTCATAAATGGATGCCGCATCCTAAATTGGGTAAAAATGTAAACCT 13824529
Query 18600 ATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCT 18659
|| || ||| | || | || || || || || ||||||||| | || ||||
Sbjct 13824530 ATAGCTGCAGAAGTAGGAATAATCGCACCGGAAATAATGTTGTTTTCGTAAAGTAGAAAC 13824589
Query 18660 CCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATC 18719
| ||| | ||| |||||||||||||| ||||| | ||| |||| ||| || |||||
Sbjct 13824590 CTTGAAAAAGGTTCACGAATACCATCAATGTCTGCTGGACAAGCATCAATGAAGGCAATA 13824649
Query 18720 AAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAAC 18770
| |||| | | || ||| || || | | | ||||||| | |||||||||
Sbjct 13824650 ATAAATACAGAAGTTGCCGTCAATAAGGTATGGATCATGAAAACCCCAAAC 13824700
Score = 113 bits (124), Expect = 1e-20
Identities = 205/297 (69%), Gaps = 5/297 (2%)
Strand=Plus/Minus
Query 18042 AAGAAGAAATGTAGACTCCTGCTA-TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCC 18100
|||| |||||| ||| || | ||||| || |||||||| |||||||| | || ||
Sbjct 12930461 AAGAGAAAATGTGTACTAATGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCC 12930402
Query 18101 AAAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCTTCTTGGCCAAATTTATATCC 18160
||| || |||||| || || ||||| || || | ||| | ||| ||||||| || ||
Sbjct 12930401 AAAATAAGCATGAGAGGCTACGATATTCTATGTTTTTTCCTTTTGAACAAATTTGTAACC 12930342
Query 18161 ATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAAT--AAGTGAGGAAGTAACAAGACTT 18218
| || ||| ||| ||||| |||| || | || | | | || || |
Sbjct 12930341 TTCATTAGCAGATTCATTTTCAGTGCTTTCCCTGACCAAACTAA--ATGTTACCAAGGAA 12930284
Query 18219 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 18278
| ||||||||| ||||| | ||||| ||| || || | || | || || ||
Sbjct 12930283 GCATGCATAGCATAGAATAGGGAGCCACCTTTTACACCAGCTAGGCCTAAGATGTGAAAT 12930224
Query 18279 GGATGCATAAGGATATTGTGTTCGGCTTGGAATACGAACATGAAATTGAAAGTACCG 18335
|| |||||| |||| ||||| |||| |||||||| | |||||||||||||||||||
Sbjct 12930223 GGGTGCATATGGATGTTGTGCTCGGGCTGGAATACAATCATGAAATTGAAAGTACCG 12930167
>seq5
Length=65875088
Score = 228 bits (252), Expect = 2e-55
Identities = 292/401 (73%), Gaps = 1/401 (0%)
Strand=Plus/Plus
Query 18390 AGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGC 18449
||||| |||| | |||||||| || || || ||||| |||||| |||||| || |||
Sbjct 14606138 AGAAA-ACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGC 14606196
Query 18450 ATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGA 18509
||||| || | | ||||| ||||| | | ||||||||| || | ||| | |
Sbjct 14606197 ATACCCAGACAGAAGCTAAGCTCCCACTCATGACCCATGTAACAAGCTACGCCAAGTAAT 14606256
Query 18510 AAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCA 18569
||||| | ||||| |||| ||| || || ||||| |||||||| || || | | |||
Sbjct 14606257 AAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACTGATGCC 14606316
Query 18570 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 18629
|||||||| |||||||| || || | ||| || || ||| | || | || || ||
Sbjct 14606317 GCTTCCCACATTGGGTAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCG 14606376
Query 18630 GATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATG 18689
|| || ||||||||||| || |||| | ||||| ||||| |||||||||||||| |||
Sbjct 14606377 GAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGAAACAGGTTCACGAATACCATCAATG 14606436
Query 18690 TCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCA 18749
|| || ||||||||||||| || ||||| | |||| | | || ||| || || | | |
Sbjct 14606437 TCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTGCCGTCAATAAGGTA 14606496
Query 18750 GGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTT 18790
|||||||| | || |||||||| || | ||| || | |||
Sbjct 14606497 GGGATCATCAAAACACCAAACCATCCAATGTAAAGACAGTT 14606537
>seq1
Length=98543444
Score = 174 bits (192), Expect = 5e-39
Identities = 190/250 (76%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 18243 CCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCG 18302
|| ||||||||||| || || || | ||| || || || ||||||||||| ||||||||
Sbjct 45009700 CCGCCGAATACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATCTTGTGTTCA 45009641
Query 18303 GCTTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAG 18362
|| |||||||| | |||||||||| |||||| || || ||||||||||||||| |
Sbjct 45009640 GCCTGGAATACAATCATGAAATTGGAAGTACTAGAGATTCCTAGAGGCATACCATCATAA 45009581
Query 18363 AAACTCCCTTGTCCAAAAGGAT-AAACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGC 18421
||||| ||||| || | || | | | ||||| |||| | |||||||| || || ||
Sbjct 45009580 AAACTTCCTTGACCGATTGGGTGGATCAAGAAA-ACTGCGGTAGCAGCTGCAACAGGAGC 45009522
Query 18422 GGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCG 18481
||||| |||||| |||||| || |||||||| || | | ||||| ||||| | ||
Sbjct 45009521 TGAATATGCAACAGCAATCCAAGGTCGCATACCAAGACGGAAGCTAAGCTCCCACTCACG 45009462
Query 18482 TCCCATGTAA 18491
|||||||||
Sbjct 45009461 ACCCATGTAA 45009452
Score = 91.5 bits (100), Expect = 4e-14
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 17864 ACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTGTTGAGTACGTCAGCCCATGTAGG 17923
||| || ||||||||||| | |||||| |||| | ||||| | || ||||| ||
Sbjct 88349404 ACGTTCATGCATAACTTCCATACCAAGGCTAGCACGGTTGATGATATCGGCCCAAGTGTT 88349345
Query 17924 TACGACTTGTC-CT--CCAGCTGCTACAATGGATTGGTTGAAGTTGAATCCATTGAGATT 17980
| || || | || | | | ||||| ||||||||||| ||||| ||||| || ||
Sbjct 88349344 AATTACATGACACTGACTATCAACTACA---GATTGGTTGAAATTGAAACCATTCAGGTT 88349288
Query 17981 AAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCC--ATATGCAAGTGACGGGCCAAGCA 18038
|||||||||||| ||| || | || ||||| || |||| | || |||||||||
Sbjct 88349287 GAAAGCCATAGTGCTGATACCTAAAGCGGTAAACCAGATATACCTACTACAGGCCAAGCA 88349228
Query 18039 GCCAAGAAGAAATGTA 18054
|| ||||||| ||||
Sbjct 88349227 GCTCAGAAGAAGTGTA 88349212
>seq11
Length=56302525
Score = 122 bits (134), Expect = 3e-23
Identities = 118/152 (78%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 18225 ATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGC 18284
|||||| ||||| | || || ||||||| || || || | |||||| || | |||
Sbjct 7156431 ATAGCACTGAATAGGGAGCCGCCAAATACCCTAGCTACGCCTAACATATGAAATGAGTGC 7156372
Query 18285 ATAAGGATATTGTGTTCGGCTTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCA 18344
|||||||| |||||||| || |||||||| | |||||||||||||||||| | ||
Sbjct 7156371 ATAAGGATGTTGTGTTCAGCCTGGAATACAATCATGAAATTGAAAGTACCAGAGACTCCT 7156312
Query 18345 AGAGGCATACCATCAGAGAAACTCCCTTGTCC 18376
||||||||||||| ||| ||||| ||||| ||
Sbjct 7156311 AGAGGCATACCATTAGAAAAACTTCCTTGACC 7156280
Score = 118 bits (130), Expect = 3e-22
Identities = 188/270 (70%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 18066 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATA 18125
||||| || |||||||| |||||||| | || ||||| || ||||| | || || |||
Sbjct 45374317 TTGTTGAAACTAGCATATTGGAAGATCAATCCGCCAAAATAAGCATGAACGGCTACGATA 45374376
Query 18126 TTATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTC 18185
|| || || ||||| ||||| || ||| | || || | || ||| ||| || ||
Sbjct 45374377 TTCTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 45374436
Query 18186 GTTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 18245
|||| || || | || || || | | ||||||||| ||||| | ||
Sbjct 45374437 CTTTCCCTGATCAAACTAGATGTTACCAAGGAAGCATGCATAGCACTGAATAGGGAGCCG 45374496
Query 18246 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCT 18305
|| ||| || || | || | || || || || ||||||||||| ||||| || ||
Sbjct 45374497 CCTTTTACACCAGCTAGGCCTAAGATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 45374556
Query 18306 TGGAATACGAACATGAAATTGAAAGTACCG 18335
|||||||| | |||||||||||||||||||
Sbjct 45374557 TGGAATACAATCATGAAATTGAAAGTACCG 45374586
>seq364
Length=5030
Score = 105 bits (116), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 18572 TTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGA 18631
||||||||||||| | || || | ||| || || ||| | || | || || | ||
Sbjct 3595 TTCCCAGATTGGGCAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCACAGGA 3536
Query 18632 TATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTC 18691
|| |||| |||||| || |||| | | | | | | | |||||||||||||| |||||
Sbjct 3535 AATAATGTCGTTTCCGTAAAGTAGAGACCGTCAAAAAAGTTCACGAATACCATCAATGTC 3476
Query 18692 AACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGG 18751
||||||||||||| || ||||| | |||| | | || ||| || || | | |||
Sbjct 3475 T---GGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTGCCGTCAATAAGGTAGG 3419
Query 18752 GATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTT 18790
|||||| | || |||||||| || | ||| || |||||
Sbjct 3418 GATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 3380
>seq2662
Length=2183
Score = 100 bits (110), Expect = 9e-17
Identities = 170/246 (69%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 18572 TTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGA 18631
|||||||||||||| || || | ||| || || ||| | || | || | || |
Sbjct 871 TTCCCAGATTGGGTGAAAATGTAAACCTATAGCTGCAGAAGTTGGAATAATGACACCGGT 930
Query 18632 TATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTC 18691
|| ||||||||| | || |||| | | | | ||| | |||||||||||||| ||||
Sbjct 931 AATAATGTTGTTTTCGTAAAGTAGAGACCGTCAAACAAGTTCACGAATACCATCAGTGTC 990
Query 18692 AACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGG 18751
||||||||||||| || ||||| | |||| | || ||| || || | | |||
Sbjct 991 T---GGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTTGCCGTCAATAAGGTAGG 1047
Query 18752 GATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTGTACTCGTAACCCAGTC 18811
|||||| | || |||||||| || | ||| || ||||| | | || || | |||||
Sbjct 1048 GATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAATGCTAGTTATCCAGTT 1107
Query 18812 ACATAA 18817
||| ||
Sbjct 1108 ACAGAA 1113
>seq12
Length=67145203
Score = 98.7 bits (108), Expect = 3e-16
Identities = 136/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 18328 AAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGATA-A 18386
||||||| || || ||||||||||||||||| ||||| ||||| || | || || |
Sbjct 45738266 AAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGA 45738325
Query 18387 ACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGG 18446
| ||||| |||| | |||||| | || || || ||||| |||||| |||||| ||
Sbjct 45738326 TCAAGAAA-ACTGCGGTAGCAGCTACAACAGGAGCTGAATATGCAACAGCAATCCAAGGT 45738384
Query 18447 CGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATG 18506
|||||||| || | | ||||| ||||| | | ||||||||| || | ||| ||
Sbjct 45738385 CGCATACCCAGACGGAAGCTAAGCTCCCACTCATGACCCATGTAACAAGCTACGCCAATT 45738444
Query 18507 AGAAAGTG 18514
| |||||
Sbjct 45738445 AAGAAGTG 45738452
Score = 87.8 bits (96), Expect = 5e-13
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 17828 GATTGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCC 17887
||| | ||||| ||||| ||||||||||||||| |||| || ||||||||||||| ||
Sbjct 54273911 GATAGCAGCTAGGTCTAGAGGGAAGTTATGAGCAATACGTTCATGCATAACTTCAATACC 54273852
Query 17888 AAGGTTAGCTCTGTTGAGTACGTCAGCCCATGT 17920
|||||||| | ||||| | |||||||| ||
Sbjct 54273851 AAGGTTAGAACGGTTGATGATATCAGCCCAAGT 54273819
>seq7
Length=68045021
Score = 86.0 bits (94), Expect = 2e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 18639 TTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGA 18698
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Sbjct 2575118 TTGTTTCCGTAAAGTAGAGACCCTGAAACAGGTTCACGAATACCATCAATGTCTACTGGA 2575177
Query 18699 GGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGA 18753
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Sbjct 2575178 GGAGCAACAATGAAGGCAATAATAAATACAGAAGTTGCAGTCAATAAGGTAGGGA 2575232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151312748730630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |