Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq3145 526 6e-145 seq2 282 1e-71 seq5 187 7e-43 seq1 145 2e-30 seq11 118 3e-22 seq3 91.5 4e-14 seq12 89.7 1e-13 seq2662 86.0 2e-12 seq364 80.6 8e-11 >seq3145 Length=155461 Score = 526 bits (582), Expect = 6e-145 Identities = 713/989 (72%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 564 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 623 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | ||| | | |||||||||||| ||| || ||| | | ||| ||||| Sbjct 624 GTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTAC 683 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || |||||||| ||||| ||||||||||| ||||| | | ||| Sbjct 684 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 743 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 || ||| || || | || || ||||| | || |||||||||| || ||| ||||| Sbjct 744 AAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTT 803 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||||||||| || || | || ||||| ||||| || || |||||||| ||||| Sbjct 804 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 863 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || ||||| || | || || | || |||||| |||| ||||| || Sbjct 864 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 923 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAA 40948 || || | ||||| || | | || ||||||||| || | | || || || Sbjct 924 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 983 Query 40949 GACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 || || || ||||| | ||| || ||||||||||| || ||||||||||| || ||||| Sbjct 984 TACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAA 1043 Query 41009 GACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACC 41068 |||| |||||| ||||| || ||| |||||||| ||||||||||||||| ||| || Sbjct 1044 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 1103 Query 41069 CTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGC 41128 ||||||| ||| || | ||||| || || ||| |||| | ||||||| ||||| Sbjct 1104 TTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 1163 Query 41129 CACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTA 41188 ||| ||||| |||| |||||| || | | | ||| ||||||| | ||| ||| Sbjct 1164 AACAGCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCATGTA 1223 Query 41189 TGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAG 41248 ||||| || | ||| ||||| | ||||| |||| ||| || || |||||||||| Sbjct 1224 ACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 1283 Query 41249 CCACTCGTCCA-GTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAG 41307 ||| || || | | |||| ||||||||||||||||| ||||||| || || || || Sbjct 1284 CCATTCATCAACGGATGCC-GCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCAG 1342 Query 41308 AGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGG 41367 | | |||| | || || || ||||| ||||| ||||| | || || || ||||| | Sbjct 1343 AAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGAAACAG 1402 Query 41368 GCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACAT 41426 | ||||| || ||||| || ||||| || || || || || ||||| || || || ||| Sbjct 1403 GTTCACGAATACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA- 1461 Query 41427 GTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGG 41486 | || || || | ||| | || ||||| | ||||||||||| || | ||| || ||| Sbjct 1462 GAAGTTGCCGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGG 1521 Query 41487 TTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || |||||||| | ||||||||| || Sbjct 1522 TTTTCAGTGCTAGTTATCCAGTTACAGAA 1550 >seq2 Length=55340444 Score = 282 bits (312), Expect = 1e-71 Identities = 662/988 (67%), Gaps = 12/988 (1%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| | ||| || || || ||||| |||| ||||| || Sbjct 13823761 AGCAGCTAGGTCTAGAGGGAAGTTATTAGCATTCCGTTCATGCATAACTTTCATACTAAG 13823820 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | ||| | | |||||||||||| || || || | | || | ||| Sbjct 13823821 GTTAGCACGGTTGATGATATCAGCCCAAGTGTTGATTACACGACACTGACTATCAAGTAC 13823880 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || |||| ||| ||||| ||||||||||| ||||| | | ||| Sbjct 13823881 AGATTGGTTGAAATTGAAACAATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 13823940 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 || ||| || || | || || ||| | | |||||||||| || ||| ||||| Sbjct 13823941 AAACCAGATACCTAATACAGGCCTAGCGGCTAAGAAGAAGTGTAACGAACGAGATTTGTT 13824000 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| |||||||||||| || | | ||||| |||| || || |||| || ||||| Sbjct 13824001 GAAACTAGCATATTGAAAGATCAATAGGCCAAAACAACCATGAGCGTCTACAATATTATA 13824060 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || |||| || | || | | || |||||| |||| |||| || Sbjct 13824061 AGTTTCTTCCTCTTGACTGAATCTTTAACATTTATTGGCAGATTCATTTTCTATGGTTTC 13824120 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAA 40948 || || | ||||| |||| | | || | | | ||| ||| | | || | || Sbjct 13824121 CCTGATCAAACTAGAAGTTACAAAGTTACCATACGTGGCACTAAATAGTGAGCCGTCGAA 13824180 Query 40949 GACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 || | || ||||| | ||| || ||||||||||| || ||||||| ||| || ||||| Sbjct 13824181 TACCCTAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTATTCGGCCTGGAA 13824240 Query 41009 GACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACC 41068 |||| |||||| ||||| || | | |||||||| ||||||||||||||| || | Sbjct 13824241 TACAATCATGAAATTGAAAGTGCAAGAGATTCCTAGAGGCATACCATCAGAAAAGTTTGC 13824300 Query 41069 CTGACCGAATGGATAAACTAAG---AATACAGCTAG-AGCTGCTGACAATGGAGCTGTGT 41124 ||||||| ||| || | |||| ||| | ||| || | || ||| |||||| | Sbjct 13824301 TTGACCGATTGGGTAGA-TAAGGAAAATTGTGGTAGCAGAT-CTAACA--GGAGCTTAAT 13824356 Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 |||| |||| ||||| |||||||||||||| | | | ||| ||||| | | ||| Sbjct 13824357 ATGCAACAACAATCCAAGGTCTCATACCTAGACGGAAGCTAAGCTCCCAATCACGACCCT 13824416 Query 41185 CGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGT 41244 ||| | ||| || | || ||||| | | ||| |||| ||| || |||||| Sbjct 13824417 TGTAACAGGATACGCCAAGAAAGAAGTGTAGAAAAATTAGTTCATAATAACCATCGTTGT 13824476 Query 41245 ATAGCCACTCGTCCA-GTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 ||| ||| || | | | |||| || ||| | |||||||| ||||||| || || || Sbjct 13824477 ATAACCATTCATAAATGGATGCC-GCATCCTAAATTGGGTAAAAATGTAAACCTATAGCT 13824535 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||| | |||| | || || || ||||| ||||| |||| | || | | ||| Sbjct 13824536 GCAGAAGTAGGAATAATCGCACCGGAAATAATGTTGTTTTCGTAAAGTAGAAACCTTGAA 13824595 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA- 41422 | || ||||| || ||||| || ||| | || || | || ||||| || || || Sbjct 13824596 AAAGGTTCACGAATACCATCAATGTCTGCTGGACAAGCATCAATGAAGGCAATAATAAAT 13824655 Query 41423 ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAG 41482 ||| | || || || | ||| | | ||||| | || |||||| | | | ||| || Sbjct 13824656 ACA-GAAGTTGCCGTCAATAAGGTATGGATCATGAAAACCCCAAACAATCAAATGTAAAG 13824714 Query 41483 GCGGTTGTCGGTGCTAGTGACCCAGTTA 41510 | ||| | ||||||| | | ||||| Sbjct 13824715 ACAGTTTACATTGCTAGTTATCTAGTTA 13824742 Score = 82.4 bits (90), Expect = 2e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 40566 TCGTGCATTACTTCCATACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATG 40625 || ||||| ||||||||||| || | | ||| | | |||||||||||| ||| Sbjct 22404922 TCTTGCATAACTTCCATACCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATT 22404981 Query 40626 ACTTTACCATTAGCGTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCC 40685 || ||| | | ||| ||||| || ||||| || || |||||||| ||||| |||||| Sbjct 22404982 ACACGACCCTGACTGTCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCC 22405041 Query 40686 ATAGTAGATATACCCATGGAGGTAAGCCATATGCC 40720 ||||| ||||| | | ||||| ||| || || Sbjct 22405042 ATAGTGCTGATACCTAAAGCGGTAAACCAGATACC 22405076 >seq5 Length=65875088 Score = 187 bits (206), Expect = 7e-43 Identities = 293/414 (71%), Gaps = 4/414 (1%) Strand=Plus/Plus Query 41088 AAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCTC 41147 ||||| || || ||| |||| | ||||||| ||||| ||| ||||| |||| | Sbjct 14606137 AAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGC 14606196 Query 41148 ATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAA 41207 ||||| || | | | ||| ||||||| ||| ||| ||||| || | ||| Sbjct 14606197 ATACCCAGACAGAAGCTAAGCTCCCACTCATGACCCATGTAACAAGCTACGCCAAGTAAT 14606256 Query 41208 AAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTG-TGCC 41266 ||||| | ||||| |||| ||| || || |||||||||| ||| || || | || |||| Sbjct 14606257 AAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACTGATGCC 14606316 Query 41267 GGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCC 41326 | ||||||| |||||||| ||||||| || || || ||| | |||| | || || Sbjct 14606317 G-CTTCCCACATTGGGTAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCACC 14606375 Query 41327 AGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTAT 41386 || ||||| ||||| ||||| | || || || ||||| || ||||| || ||||| || Sbjct 14606376 GGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGAAACAGGTTCACGAATACCATCAAT 14606435 Query 41387 ATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATG 41445 ||||| || || || || || ||||| || || || ||| | || || || | ||| | Sbjct 14606436 GTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA-GAAGTTGCCGTCAATAAGG 14606494 Query 41446 CTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAG 41499 || ||||| | ||||||||||| || | ||| || | ||| || ||||||| Sbjct 14606495 TAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACAGTTTTCAGTGCTAG 14606548 >seq1 Length=98543444 Score = 145 bits (160), Expect = 2e-30 Identities = 217/307 (71%), Gaps = 2/307 (1%) Strand=Plus/Minus Query 40941 CCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCT 41000 || || || || || || ||||| | ||| || ||||||||||| || || |||||||| Sbjct 45009700 CCGCCGAATACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATCTTGTGTTCA 45009641 Query 41001 GCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAG 41060 || ||||| |||| |||||| ||| | || | | |||||||| ||||||||||||| | Sbjct 45009640 GCCTGGAATACAATCATGAAATTGGAAGTACTAGAGATTCCTAGAGGCATACCATCATAA 45009581 Query 41061 AAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCT 41120 ||| || ||||||| ||| | | ||||| || || ||| |||| | |||||| Sbjct 45009580 AAACTTCCTTGACCGATTGGGTGGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCT 45009521 Query 41121 GTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTA 41180 | ||||| ||| ||||| |||| |||||| || | | | ||| ||||||| | | Sbjct 45009520 GAATATGCAACAGCAATCCAAGGTCGCATACCAAGACGGAAGCTAAGCTCCCACTCACGA 45009461 Query 41181 CCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCG 41240 || ||| ||||| || | ||| | ||| | ||||| | ||| || || || Sbjct 45009460 CCCATGTAACAAGCTACGCCAAGTAAGATGTGTAGAACAATTA--ACATAAGGACCAGCG 45009403 Query 41241 TTGTATA 41247 ||||||| Sbjct 45009402 TTGTATA 45009396 Score = 84.2 bits (92), Expect = 6e-12 Identities = 135/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 40562 ACGCTCGTGCATTACTTCCATACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGG 40621 ||| || ||||| ||||||||||| || || | ||| | | ||| |||||||| Sbjct 88349404 ACGTTCATGCATAACTTCCATACCAAGGCTAGCACGGTTGATGATATCGGCCCAAGTGTT 88349345 Query 40622 AATGACTTTACCATTAGCGTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAA 40681 ||| || | || | | || ||||| || ||||| || || |||||||| ||||| || Sbjct 88349344 AATTACATGACACTGACTATCAACTACAGATTGGTTGAAATTGAAACCATTCAGGTTGAA 88349285 Query 40682 AGCCATAGTAGATATACCCATGGAGGTAAGCC--ATATGCCAATAACCGGGAAAGCACCA 40739 ||||||||| ||||| | | ||||| || |||| || | || || ||||| | Sbjct 88349284 AGCCATAGTGCTGATACCTAAAGCGGTAAACCAGATATACCTACTACAGGCCAAGCAGCT 88349225 Query 40740 AGAAAGAAGTGTA 40752 |||||||||| Sbjct 88349224 CAGAAGAAGTGTA 88349212 >seq11 Length=56302525 Score = 118 bits (130), Expect = 3e-22 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 40941 CCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCT 41000 || ||||| || | || ||||| | |||||| |||| |||||| || ||||||||||| Sbjct 7156413 CCGCCAAATACCCTAGCTACGCCTAACATATGAAATGAGTGCATAAGGATGTTGTGTTCA 7156354 Query 41001 GCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAG 41060 || ||||| |||| |||||| ||||| || ||| || ||||| ||||||||||| ||| Sbjct 7156353 GCCTGGAATACAATCATGAAATTGAAAGTACCAGAGACTCCTAGAGGCATACCATTAGAA 7156294 Query 41061 AAAGAACCCTGACCGAATGG 41080 ||| || ||||||| ||| Sbjct 7156293 AAACTTCCTTGACCGATTGG 7156274 Score = 98.7 bits (108), Expect = 3e-16 Identities = 208/307 (68%), Gaps = 5/307 (2%) Strand=Plus/Plus Query 40727 CGGGAAAGCACCAAGA-AAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTGAA 40785 ||||||| | |||| |||| ||||| || ||| |||||||| ||||||||| | Sbjct 45374283 CGGGAAA---CAAAGAGAAGATGTGTA-CGAACGAGAGTTGTTGAAACTAGCATATTGGA 45374338 Query 40786 ATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTGAC 40845 | || | || ||||| ||| | || | |||||||| || ||||| || | || |||| Sbjct 45374339 AGATCAATCCGCCAAAATAAGCATGAACGGCTACGATATTCTAAGTTTCTTCCTCTTGAC 45374398 Query 40846 CAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGATTGAGGAAG 40905 | || | || || | || |||||| |||| ||| | |||| || | || | Sbjct 45374399 CGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGCTTTCCCTGATCAAACTAGATG 45374458 Query 40906 TAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCCGA 40965 | || | | | ||||||||| || | | || || || || || | ||| | Sbjct 45374459 TTACCAAGGAAGCATGCATAGCACTGAATAGGGAGCCGCCTTTTACACCAGCTAGGCCTA 45374518 Query 40966 GCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGA 41025 || || ||||||||||| || |||||||| || || ||||| |||| |||||| |||| Sbjct 45374519 AGATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAATTGA 45374578 Query 41026 ATGTTCC 41032 | || || Sbjct 45374579 AAGTACC 45374585 >seq3 Length=70787664 Score = 91.5 bits (100), Expect = 4e-14 Identities = 114/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 40537 AGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTCTGTC 40596 |||||||||| ||||| ||||| || || || ||||| | ||||||||| || | | Sbjct 48907112 AGTCTAGAGGGAAGTTATGAGCATTGCGTTCATGCATAAATTCCATACCAAGGTTAGCAC 48907171 Query 40597 TGTTAAGAACATCAGCCCAAGTAGGAA-TGACTTTACCATTAGCGTCTACTACTGACTGG 40655 ||| | | |||||||||||| || | || ||| | | ||| |||| || ||| Sbjct 48907172 GGTTGATGATATCAGCCCAAGTTTTAATTTACACGACCCTGACTGTCAACTATAGATTGG 48907231 Query 40656 TTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGT 40690 || || || |||||||| ||||| ||||||||||| Sbjct 48907232 TTGAAATTGAAACCATTTAGGTTGAAAGCCATAGT 48907266 >seq12 Length=67145203 Score = 89.7 bits (98), Expect = 1e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 41028 GTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACT 41087 || ||| |||||||| ||||||||||||||| ||| || ||||||| ||| || | Sbjct 45738268 GTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGATC 45738327 Query 41088 AAGAATACAGCTAGAGCTGCTGACAA-TGGAGCTGTGTATGCCACAAATATCCATGGTCT 41146 ||||| || || ||| ||| |||| ||||||| ||||| ||| ||||| |||| Sbjct 45738328 AAGAAAACTGCGGTAGCAGCT-ACAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCG 45738386 Query 41147 CATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAA 41206 |||||| || | | | ||| ||||||| ||| ||| ||||| || ||||| Sbjct 45738387 CATACCCAGACGGAAGCTAAGCTCCCACTCATGACCCATGTAACAAGCTACGCCAATTAA 45738446 Query 41207 AAAGTG 41212 ||||| Sbjct 45738447 GAAGTG 45738452 >seq2662 Length=2183 Score = 86.0 bits (94), Expect = 2e-12 Identities = 169/247 (68%), Gaps = 5/247 (2%) Strand=Plus/Plus Query 41270 TTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGA 41329 |||||||||||||| ||||||| || || || ||| | |||| | | || | Sbjct 871 TTCCCAGATTGGGTGAAAATGTAAACCTATAGCTGCAGAAGTTGGAATAATGACACCGGT 930 Query 41330 TATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATC 41389 ||||| ||||| |||| | || || | |||| | ||||| || ||||| | || Sbjct 931 AATAATGTTGTTTTCGTAAAGTAGAGACCGTCAAACAAGTTCACGAATACCATCAGTGTC 990 Query 41390 TACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTG 41448 | || || || || || ||||| || || || ||| | | || || | ||| | | Sbjct 991 T---GGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTT-GCCGTCAATAAGGTAG 1046 Query 41449 GAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGT 41508 | ||||| | ||||||||||| || | ||| || ||||| || ||||||| | ||||| Sbjct 1047 GGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAATGCTAGTTATCCAGT 1106 Query 41509 TACAAAA 41515 |||| || Sbjct 1107 TACAGAA 1113 >seq364 Length=5030 Score = 80.6 bits (88), Expect = 8e-11 Identities = 159/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 41270 TTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGA 41329 ||||||||||||| | ||||||| || || || ||| | |||| | || | || Sbjct 3595 TTCCCAGATTGGGCAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCACAGGA 3536 Query 41330 TATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATC 41389 ||||| | ||| ||||| | || || | ||| | ||||| || ||||| || || Sbjct 3535 AATAATGTCGTTTCCGTAAAGTAGAGACCGTCAAAAAAGTTCACGAATACCATCAATGTC 3476 Query 41390 TACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTG 41448 | || || || || || ||||| || || || ||| | || || || | ||| | | Sbjct 3475 T---GGAGGAGCAGCAATGAAGGCAATAATAAATACA-GAAGTTGCCGTCAATAAGGTAG 3420 Query 41449 GAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGT 41500 | ||||| | ||||||||||| || | ||| || ||||| || ||||||| Sbjct 3419 GGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAATGCTAGT 3368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143697033164430