Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq3145 610 2e-170
seq2 378 2e-100
seq5 203 1e-47
seq11 159 1e-34
seq3 107 6e-19
seq12 93.3 1e-14
seq1 87.8 5e-13
seq364 84.2 7e-12
>seq3145
Length=155461
Score = 610 bits (676), Expect = 2e-170
Identities = 731/983 (74%), Gaps = 10/983 (1%)
Strand=Plus/Minus
Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569
||||||| | ||| || | ||||||||||| |||| |||||||| |||||||
Sbjct 1545 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 1486
Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628
|| | || ||| | || | |||| || |||||||| |||||||| ||||| ||||
Sbjct 1485 CCC-TACCTTATTGACGGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAG 1427
Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688
| ||||||||||| || || ||||| || || || || ||||| ||||||||||| |
Sbjct 1426 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAACATTA 1367
Query 19689 TATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 19746
| || || ||| | |||| | | ||| || || || |||| || |||||||| ||
Sbjct 1366 TTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTACATTTTTACCCAATCTG 1309
Query 19747 GGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 19806
|||||| || ||||||||||| | |||||||| || || | |||| | || |
Sbjct 1308 GGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCT 1249
Query 19807 CCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACT 19866
|||||| | ||||| | | ||||||||| || |||||||| ||||||| || ||
Sbjct 1248 ACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCT 1189
Query 19867 AGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGT 19926
|| ||| | ||||||||| |||||| || || ||||| |||||||| || | || ||
Sbjct 1188 GGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGT 1129
Query 19927 CTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCT 19985
||||| | ||||||| | ||||| || || || || |||| ||||||| | || ||||
Sbjct 1128 -TTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCT 1070
Query 19986 CGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGT 20045
| ||||| ||||| | |||| | |||||||| || ||||| ||||| || |||||||| |
Sbjct 1069 CTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCAT 1010
Query 20046 TCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTT 20105
| |||||| | || || ||||| |||||||| || || ||||||||||| ||||| ||||
Sbjct 1009 TTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 950
Query 20106 CGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGT 20164
| |||| || | || | ||| | | || || || ||| | ||| | || | |||
Sbjct 949 C-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 891
Query 20165 TACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGA 20224
|||| || || ||||| ||||| || ||||| |||||||||||||||||||| |||||
Sbjct 890 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGC 831
Query 20225 CGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCT 20284
|| |||||||||||||| ||| ||||||||| ||||| ||||||||||||| |||
Sbjct 830 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGCT 771
Query 20285 GCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAAT 20344
|| ||||| || ||||| || ||||| | || || || | || ||||| || ||
Sbjct 770 GCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAAC 711
Query 20345 CTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACT 20404
|| || |||||||| || ||||| || | | |||| | |||||||| ||| | |||
Sbjct 710 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACT 651
Query 20405 TGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCT 20464
|||||||| || |||| |||||||| || || | || || ||||||||||| ||||||
Sbjct 650 TGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 591
Query 20465 CATAACTTCCCACTTGACCTTGC 20487
||||||||||| || ||||| ||
Sbjct 590 CATAACTTCCCTCTAGACCTAGC 568
>seq2
Length=55340444
Score = 378 bits (418), Expect = 2e-100
Identities = 664/960 (69%), Gaps = 8/960 (1%)
Strand=Plus/Minus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||| ||||||| || | | |||||| | ||||| || | || ||| | || |
Sbjct 13824720 AACTGTCTTTACATTTGATTGTTTGGGGTTTTCATGAT-CCATACCTTATTGACGGCAAC 13824662
Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|||| || |||||||| ||||||| ||| |||| ||||||||||| || || ||
Sbjct 13824661 TTCTGTATTTATTATTGCCTTCATTGATGCTTGTCCAGCAGACATTGATGGTATTCGTGA 13824602
Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710
||| | || | || ||||| | ||||||||| || || || || | |||| |
Sbjct 13824601 ACCTTTTTCAAGGTTTCTACTTTACGAAAACAACATTATTTCCGGTGCGATTATTCCTAC 13824542
Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768
| ||| || || || |||| || |||||||||| ||| || || || |||||
Sbjct 13824541 TTCTGCA--GCTATAGGTTTACATTTTTACCCAATTTAGGATGCGGCATCCATTTATGAA 13824484
Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828
||| | ||||||| || | |||| | | | |||||| | ||||| | |
Sbjct 13824483 TGGTTATACAACGATGGTTATTATGAACTAATTTTTCTACACTTCTTTCTTGGCGTATCC 13824424
Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888
||||| ||| || || ||||| ||||||| || ||||| ||||| ||||||||| |
Sbjct 13824423 TGTTACAAGGGTCGTGATTGGGAGCTTAGCTTCCGTCTAGGTATGAGACCTTGGATTGTT 13824364
Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGT 19948
||||| || | ||||| ||| | | || | | | || || ||||||| | |||
Sbjct 13824363 GTTGCATATTAAGCTCCTGTTAGATCTGCTACCACAATTTTCCTTATCTACCCAATCGGT 13824304
Query 19949 CAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTG 20008
|| | | ||| || |||| ||||||| | || ||||| | || ||||| | |||| |
Sbjct 13824303 CAAGCAAACTTTTCTGATGGTATGCCTCTAGGAATCTCTTGCACTTTCAATTTCATGATT 13824244
Query 20009 GTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGT 20068
|||||||| |||||| | ||||| || |||||||| || |||||| | || || ||| |
Sbjct 13824243 GTATTCCAGGCCGAATACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTAGG 13824184
Query 20069 GTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTG 20128
||||||| || |||||||| ||||| | | | ||| |||| || || | | |||
Sbjct 13824183 GTATTCGACGGCTCACTATTTAGTGCCACGTATGGTAACTTTGTAACTTC-TAGTTTGAT 13824125
Query 20129 C-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGA 20187
| | || || | ||| | ||| | || | |||| | || | ||||| |||||
Sbjct 13824124 CAGGGAAACCATAGAAAATGAATCTGCCAATAAATGTTAAAGATTCAGTCAAGAGGAAGA 13824065
Query 20188 GACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTC 20247
|| ||||| || |||| ||||||||||| ||||| | |||||||| ||||| |||
Sbjct 13824064 AACTTATAATATTGTAGACGCTCATGGTTGTTTTGGCCTATTGATCTTTCAATATGCTAG 13824005
Query 20248 TTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 20307
||||||||| ||||| ||||||||||| | || || |||| || |||| || ||
Sbjct 13824004 TTTCAACAAATCTCGTTCGTTACACTTCTTCTTAGCCGCTAGGCCTGTATTAGGTATCTG 13823945
Query 20308 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCA 20367
||| | || || || | || ||||| || || || || ||||||| || |||||
Sbjct 13823944 GTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATTGTTTCAATTTCAACCA 13823885
Query 20368 GTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGC 20427
|| | || || | | ||||||| || | ||||||||||| || |||| |||||
Sbjct 13823884 ATCTGTACTTGATAGTCAGTGTCGTGTAATCAACACTTGGGCTGATATCATCAACCGTGC 13823825
Query 20428 TAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487
||| || | | | || |||||||||||||||||| |||||||||| || ||||| ||
Sbjct 13823824 TAACCTTAGTATGAAAGTTATGCATGAACGGAATGCTAATAACTTCCCTCTAGACCTAGC 13823765
Score = 147 bits (162), Expect = 7e-31
Identities = 196/270 (73%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 19988 GGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 20047
||||| ||||| | |||| | |||||||| |||| || ||||| | |||||||| ||
Sbjct 12930168 GGTACTTTCAATTTCATGATTGTATTCCAGCCCGAGCACAACATCCATATGCACCCATTT 12930227
Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107
||||| | || | ||||||||| ||||| || |||||| ||| ||||| | |||
Sbjct 12930228 CACATCTTAGGCCTAGCTGGTGTAAAAGGTGGCTCCCTATTCTATGCTATGCATGCTTCC 12930287
Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTA 20166
| || || | | | ||| | | || | |||||| | ||| | || | |||||
Sbjct 12930288 TTGGTAACATT-TAGTTTGGTCAGGGAAAGCACTGAAAATGAATCTGCTAATGAAGGTTA 12930346
Query 20167 CAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACG 20226
||| |||| ||| | ||| | || || || ||||||||| |||||| ||| ||||| ||
Sbjct 12930347 CAAATTTGTTCAAAAGGAAAAAACATAGAATATCGTAGCCTCTCATGCTTATTTTGGCCG 12930406
Query 20227 TTTGATCTTCCAATACGCTTCTTTCAACAA 20256
|||||||||||||| ||| |||||||||
Sbjct 12930407 ATTGATCTTCCAATATGCTAGTTTCAACAA 12930436
Score = 86.0 bits (94), Expect = 2e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 20288 TGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTG 20347
||||| || ||||| || ||||| | || || || | || ||||| || || ||
Sbjct 22405088 TGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTA 22405029
Query 20348 AACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGG 20407
|| |||||||| || ||||| || | | |||| | |||||||| ||| | ||||||
Sbjct 22405028 AATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGG 22404969
Query 20408 GCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGA 20454
||||| || |||| |||||||| || || | || || ||||| ||
Sbjct 22404968 GCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCAAGA 22404922
>seq5
Length=65875088
Score = 203 bits (224), Expect = 1e-47
Identities = 291/404 (72%), Gaps = 7/404 (2%)
Strand=Plus/Minus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||| ||||||| |||| |||||||| ||||||| || | || ||| | || |
Sbjct 14606537 AACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACGGCAAC 14606479
Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|||| || |||||||| |||||||| ||||| ||||| ||||||||||| || || ||
Sbjct 14606478 TTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGA 14606419
Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710
||| || || || || ||||| ||||||||||| || || || ||| | |||| |
Sbjct 14606418 ACCTGTTTCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTAC 14606359
Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768
| ||| || || || |||| || |||||||| |||||||| ||| ||||||||
Sbjct 14606358 TTCTGCA--GCTATAGGTTTACATTTTTACCCAATGTGGGAAGCGGCATCAGTTGATGAA 14606301
Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828
||| | |||||||| || || | |||| | || | ||||| | ||||| | |
Sbjct 14606300 TGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTATTACTTGGCGTAGCT 14606241
Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888
||||||||| | |||||||| ||||||| | || || ||| | ||||||||| |
Sbjct 14606240 TGTTACATGGGTCATGAGTGGGAGCTTAGCTTCTGTCTGGGTATGCGACCTTGGATTGCT 14606181
Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCT 19932
||||| || || ||||| |||||||| || | || || |||||
Sbjct 14606180 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGT-TTTCT 14606138
>seq11
Length=56302525
Score = 159 bits (176), Expect = 1e-34
Identities = 213/292 (73%), Gaps = 3/292 (1%)
Strand=Plus/Minus
Query 19988 GGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 20047
||||| ||||| | |||| | |||||||| || || || ||||| || |||||||| ||
Sbjct 45374585 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 45374526
Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107
||||| | || | ||||||||| || || || ||||||||||| ||||| | |||
Sbjct 45374525 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCC 45374466
Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTA 20166
| || || || | | ||| | | || | || ||| | ||| | || | |||||
Sbjct 45374465 TTGGTAACATC-TAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 45374407
Query 20167 CAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACG 20226
|| || || ||||| ||||| || || || |||||||||| ||||| ||| ||||| |
Sbjct 45374406 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGTTCATGCTTATTTTGGCGG 45374347
Query 20227 TTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278
|||||||||||||| ||| ||||||||| ||||| ||||| |||||
Sbjct 45374346 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC-GTACACATCTTC 45374296
Score = 109 bits (120), Expect = 2e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 19938 ACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCA 19997
|||| | ||||| || || || || ||| ||||||| | || |||| ||||| ||||
Sbjct 7156272 ACCCAATCGGTCAAGGAAGTTTTTCTAATGGTATGCCTCTAGGAGTCTCTGGTACTTTCA 7156331
Query 19998 ACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTG 20057
| | |||| | |||||||| || ||||| ||||| || |||||| | || || ||| | |
Sbjct 7156332 ATTTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACTCATTTCATATGTTAG 7156391
Query 20058 GTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGAT 20097
| || ||| | ||||| || || || ||||||||||| ||
Sbjct 7156392 GCGTAGCTAGGGTATTTGGCGGCTCCCTATTCAGTGCTAT 7156431
Score = 98.7 bits (108), Expect = 3e-16
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 20163 GTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTG 20222
|||||| || | ||||| ||| | || ||||| || |||| || ||||||||| ||||
Sbjct 54981813 GTTACATATTCTGTCAAGAGGAAAAAACTTATAATATTGTAGTCGTTCATGGTTATTTTG 54981754
Query 20223 GACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTG 20282
| | ||||||| || ||| | | |||||| | ||||| |||||||||||||||
Sbjct 54981753 GCTGATTGATCTACCGATATGTTAGTTTCAATGACTCTCGTTCGTTACACTTCTTCCTTG 54981694
Query 20283 CTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGC-CTTGGGCGTTTCTACAATGGCGTTT 20341
|||| |||| | ||||| || ||||| | || || || || || ||| ||
Sbjct 54981693 CTGCTTGGCATATAGTAGGTATCTGGTTTACCGCTTTTAGGTATTAGCACTATGCTTTTC 54981634
Query 20342 AATCTGAACGGTTTCAACTTTAACCAGTC 20370
||||| || ||||||| || | ||| ||
Sbjct 54981633 AATCTAAATAGTTTCAATTTCAGCCAATC 54981605
Score = 93.3 bits (102), Expect = 1e-14
Identities = 91/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 20163 GTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTG 20222
|||||| || || ||||| ||||| || || || ||| |||||||||||| ||| ||||
Sbjct 20415991 GTTACAGATTCGGTCAAGAGGAAGAAACTTAGAATATCATAGCCGCTCATGCTTATTTTG 20416050
Query 20223 GACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278
| || || ||||||||||| ||| ||||||||| ||||| ||||| |||||
Sbjct 20416051 GCCGATTTATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC-GTACACATCTTC 20416105
Score = 91.5 bits (100), Expect = 4e-14
Identities = 91/117 (78%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221
|||||||| || || ||| | | ||| || | || |||||||||||||||| ||| |||
Sbjct 23418647 GGTTACAAATTCGGTCAACAGGTAGAAACTCAGAATATCGTAGCCGCTCATGCTTATTTT 23418588
Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278
| || |||||||||||||| ||| ||||||||| |||||| |||| |||||
Sbjct 23418587 TGTCGATTGATCTTCCAATATGCTATTTTCAACAACTCTCGTTCT-TACATATCTTC 23418532
>seq3
Length=70787664
Score = 107 bits (118), Expect = 6e-19
Identities = 117/154 (76%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 20330 ACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGT 20389
|| ||||| || || || || |||||||| || ||||| || | | |||| | |||
Sbjct 48907266 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGACAGTCAGGGT 48907207
Query 20390 CGTGTCA-TTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGAT 20448
||||| | || | ||||||||||| || |||| |||||||| || || | || | ||
Sbjct 48907206 CGTGTAAATTAAAACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAATTTAT 48907147
Query 20449 GCATGAACGGAATGCTCATAACTTCCCACTTGAC 20482
||||||||| ||||||||||||||||| || |||
Sbjct 48907146 GCATGAACGCAATGCTCATAACTTCCCTCTAGAC 48907113
>seq12
Length=67145203
Score = 93.3 bits (102), Expect = 1e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 20387 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTG 20446
|||| ||| ||| | ||||||||||| || |||| ||| |||| || || |||| ||
Sbjct 54273804 GGTCATGTAATTAACACTTGGGCTGATATCATCAACCGTTCTAACCTTGGTATTGAAGTT 54273863
Query 20447 ATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487
||||||||||| | ||||||||||||||| || ||||| ||
Sbjct 54273864 ATGCATGAACGTATTGCTCATAACTTCCCTCTAGACCTAGC 54273904
>seq1
Length=98543444
Score = 87.8 bits (96), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 20268 TACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTT--GGTTCGCTGCCTTGGGCGT 20325
||||||||||| ||||| ||||| || ||||| || | |||| | || || || |
Sbjct 88349212 TACACTTCTTCTGAGCTGCTTGGCCTGTAGTAGGTATATCTGGTTTACCGCTTTAGGTAT 88349271
Query 20326 TTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAA 20385
|| ||||| || || ||||| |||||||| || ||||| || | | || | |
Sbjct 88349272 CAGCACTATGGCTTTCAACCTGAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCA 88349331
Query 20386 TGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGT 20445
||| ||| ||| | |||||||| || || |||| ||||||| || || | || ||
Sbjct 88349332 GTGTCATGTAATTAACACTTGGGCCGATATCATCAACCGTGCTAGCCTTGGTATGGAAGT 88349391
Query 20446 GATGCATGAACG 20457
|||||||||||
Sbjct 88349392 TATGCATGAACG 88349403
>seq364
Length=5030
Score = 84.2 bits (92), Expect = 7e-12
Identities = 157/223 (70%), Gaps = 11/223 (5%)
Strand=Plus/Plus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||||||||||| |||| |||||||| |||||| ||| | || ||| | || |
Sbjct 3380 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGA-TCCCTACCTTATTGACGGCAAC 3438
Query 19592 ATCTG-CTTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|||| || |||||||| |||||||| ||||| ||| ||||||||||| || || ||
Sbjct 3439 TTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCA---GACATTGATGGTATTCGTGA 3495
Query 19651 ACCCGTAT-CCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA 19709
|| | | |||| || ||||| |||||| |||| || || | ||| | |||| |
Sbjct 3496 ACTTTTTTGACGGT-CTCTACTTTACGGAAACGACATTATTTCCTGTGCCATTATTCCTA 3554
Query 19710 --GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAA 19750
| ||| || || || |||| || | |||||| ||||||
Sbjct 3555 CTTCTGCA--GCTATAGGTTTACATTTTTGCCCAATCTGGGAA 3595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148823241709410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |