Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=98543444 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 |||| ||||| ||||| || ||| || || | ||||||||||| || |||||| | Sbjct 87380390 CTTTCTGAATGTTGTAATCAGCTAGAGTA-CGTCCATCTTCGAGCTGCTTTCCGGCGAAG 87380332 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | ||||| || ||||| || | ||| || || || ||||| ||| | | Sbjct 87380331 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTG 87380272 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | |||||| | | ||||||||| || || || | || ||||| ||||||||||| Sbjct 87380271 TCAATAGTGTCGCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 87380212 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 87380211 AAGATCTGCAT 87380201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424918112397240