Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq3145 545 3e-150 seq2 338 8e-88 seq1 174 2e-38 seq5 170 2e-37 seq11 136 5e-27 seq3 116 4e-21 seq12 113 5e-20 >seq3145 Length=155461 Score = 545 bits (604), Expect = 3e-150 Identities = 695/954 (73%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | || || | | ||| Sbjct 1516 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTC-TGTA 1458 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| |||| || ||||| || || || || || || || |||||||| ||||| || Sbjct 1457 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTT 1398 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 |||| |||||||| || ||||||||||| || || || || | | || | || Sbjct 1397 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1338 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || |||| || ||||||||||||||||| ||| | ||||| |||||| | ||| Sbjct 1337 GCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATAC 1278 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 || || || || || |||| |||| | |||||| | | || | | ||||||| Sbjct 1277 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATG 1218 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||| ||||| | | | || || ||||| |||||||| ||||||||| Sbjct 1217 GGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 1158 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | || || | ||||||||| | |||| ||| ||||||||||| | Sbjct 1157 TCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCAAGGAAGT 1098 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || ||||||||||||||||| || || || ||||| ||||| || ||| |||||||||| Sbjct 1097 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAG 1038 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || || |||||||| || ||||||||||| || ||| | || ||||| || || || || Sbjct 1037 GCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGC 978 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745 || || || ||| || ||||| || | || |||||| | | || || || Sbjct 977 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 918 Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805 || ||||| ||||| || | ||||||| |||||| ||||| ||||| || || || Sbjct 917 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 858 Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865 || ||||| || || ||||| ||||| || | |||||||| |||||| |||||| ||| Sbjct 857 ATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAC 798 Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925 || | | ||||||||||| || || | || || || | ||||||||||| || Sbjct 797 TCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCT 738 Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985 | ||| | |||| ||||| |||||||| || |||||||| |||||||| ||||| | Sbjct 737 TTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTT 678 Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045 |||| ||| || ||| || |||| |||||| | |||||||| ||||||||| Sbjct 677 GACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGT 618 Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099 |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct 617 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 564 Score = 143 bits (158), Expect = 3e-29 Identities = 205/287 (71%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || || ||||| ||| | || | || || | | ||| || || Sbjct 120918 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCG 120859 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 ||||||| ||| ||||| || || || || ||||| || ||||| | ||||| ||||| Sbjct 120858 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTGTATGTCCTAT 120799 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAGA 19472 || |||| || || |||||| | || | ||| || | |||||| | | Sbjct 120798 AGATTTACCCGTTGTTGATTGGAAGTTGGA--AACTGATATTCGAAAGAAACGATTGCTT 120741 Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532 ||||| || || |||||| ||||| || || ||||| ||||| |||||||||||| Sbjct 120740 AATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGCCCA 120681 Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 ||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 120680 ACAAATTGTTTATCAATGACCGAAGAATATGAACTTTCTACTTATGA 120634 >seq2 Length=55340444 Score = 338 bits (374), Expect = 8e-88 Identities = 656/959 (68%), Gaps = 12/959 (1%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTC-ACTGCTGCAGCATGT 176205 ||||| || | | |||||| || ||||||| |||| || | || || | | ||| Sbjct 13824713 TTTACATTTGATTGTTTGGGGTTTTCATGAT-CCATACCTTATTGACGGCAACTTC-TGT 13824656 Query 176206 -TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGT 176264 ||||| |||| || |||| || || | || || || |||||||| ||||| | Sbjct 13824655 ATTTATTATTGCCTTCATTGATGCTTGTCCAGCAGACATTGATGGTATTCGTGAACCTTT 13824596 Query 176265 AGCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAA 176324 || | | |||||| || | ||||||||| || || || || | | || | || Sbjct 13824595 TTCAAGGTTTCTACTTTACGAAAACAACATTATTTCCGGTGCGATTATTCCTACTTCTGC 13824536 Query 176325 CGCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTA 176384 || || || |||| || |||||||| | ||| || ||| | || | |||||| | || Sbjct 13824535 AGCTATAGGTTTACATTTTTACCCAATTTAGGATGCGGCATCCATTTATGAATGGTTATA 13824476 Query 176385 CAATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACAT 176444 ||| | || || |||| || | | |||||| || | || | || ||||| Sbjct 13824475 CAACGATGGTTATTATGAACTAATTTTTCTACACTTCTTTCTTGGCGTATCCTGTTACAA 13824416 Query 176445 GGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATA 176504 ||| || | ||||| ||||| | | | ||||| ||| | |||||||| ||||||||| Sbjct 13824415 GGGTCGTGATTGGGAGCTTAGCTTCCGTCTAGGTATGAGACCTTGGATTGTTGTTGCATA 13824356 Query 176505 CTCTGCACCAGT---ATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGG 176561 | || || || |||||| | | || ||||||| |||| ||| ||||||||| Sbjct 13824355 TTAAGCTCCTGTTAGATCTGCTACCA---CAATTTTCCTTATCTACCCAATCGGTCAAGC 13824299 Query 176562 ATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATT 176621 | || ||||||||||||||||| || || || | || ||||| || ||| ||||||| Sbjct 13824298 AAACTTTTCTGATGGTATGCCTCTAGGAATCTCTTGCACTTTCAATTTCATGATTGTATT 13824239 Query 176622 CCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTT 176681 ||| || || ||||||| || ||||||||||| || ||| | || ||||| | || || Sbjct 13824238 CCAGGCCGAATACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTAGGGTATT 13824179 Query 176682 TGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGA 176741 | || || || || || | | | || | |||| |||||| | | || || Sbjct 13824178 CGACGGCTCACTATTTAGTGCCACGTATGGTAACTTTGTAACTTCTAGTTTGATCAGGGA 13824119 Query 176742 GACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATA 176801 || | ||||| ||||| || | |||| | |||| | ||||| ||||| || || Sbjct 13824118 AACCATAGAAAATGAATCTGCCAATAAATGTTAAAGATTCAGTCAAGAGGAAGAAACTTA 13824059 Query 176802 CAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAA 176861 || ||||||| || || |||| ||||| | | ||||| || |||||| |||||| Sbjct 13824058 TAATATTGTAGACGCTCATGGTTGTTTTGGCCTATTGATCTTTCAATATGCTAGTTTCAA 13823999 Query 176862 TAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTAC 176921 || || | | ||||||||| | || || || || | | ||||||||||| Sbjct 13823998 CAAATCTCGTTCGTTACACTTCTTCTTAGCCGCTAGGCCTGTATTAGGTATCTGGTTTAC 13823939 Query 176922 TGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGT 176981 || | ||| | |||| ||||| |||||||| || ||||||| |||||||| ||||| Sbjct 13823938 CGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATTGTTTCAATTTCAACCAATCTGT 13823879 Query 176982 CTTAGACAACTCTG-GTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACC 177040 | || | || | || || || || |||| |||||| | |||||||| |||| Sbjct 13823878 ACTTGA-TAGTCAGTGTCGTGTAATCAACACTTGGGCTGATATCATCAACCGTGCTAACC 13823820 Query 177041 TTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099 || ||||| |||||||||| || || |||||| | |||||||| || ||||| |||||| Sbjct 13823819 TTAGTATGAAAGTTATGCATGAACGGAATGCTAATAACTTCCCTCTAGACCTAGCTGCT 13823761 Score = 122 bits (134), Expect = 1e-22 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 176596 GGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTC 176655 ||||| ||||| || ||| |||||||||| | ||||||||||| | ||||||||||| Sbjct 12930168 GGTACTTTCAATTTCATGATTGTATTCCAGCCCGAGCACAACATCCATATGCACCCATTT 12930227 Query 176656 CATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGT 176715 || || | || |||| ||||| ||||| || || |||| || ||||| | Sbjct 12930228 CACATCTTAGGCCTAGCTGGTGTAAAAGGTGGCTCCCTATTCTATGCTATGCATGCTTCC 12930287 Query 176716 CTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTAC 176775 | || || | | | || || || | || ||||| ||||| || | |||||| Sbjct 12930288 TTGGTAACATTTAGTTTGGTCAGGGAAAGCACTGAAAATGAATCTGCTAATGAAGGTTAC 12930347 Query 176776 AAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGT 176835 ||||| | ||| | ||| | ||||| || || ||||| | || | ||| ||||| || Sbjct 12930348 AAATTTGTTCAAAAGGAAAAAACATAGAATATCGTAGCCTCTCATGCTTATTTTGGCCGA 12930407 Query 176836 CTTATCTTCCAGTATGCTTCTTTCAATAACTC 176867 | |||||||| |||||| |||||| ||||| Sbjct 12930408 TTGATCTTCCAATATGCTAGTTTCAACAACTC 12930439 Score = 116 bits (128), Expect = 4e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 176911 ATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTC 176970 ||||||||||| || | ||| | |||| ||||| |||||||| || |||||||| ||| Sbjct 22405073 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 22405014 Query 176971 AACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAAC 177030 ||||| ||||| | |||| ||| || ||| || |||| |||||| | ||| Sbjct 22405013 AACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAAC 22404954 Query 177031 CGTGCAAACCTTGGTATGGAAGTTATGCACGA 177062 ||||| ||||||||||||||||||||||| || Sbjct 22404953 CGTGCTAACCTTGGTATGGAAGTTATGCAAGA 22404922 >seq1 Length=98543444 Score = 174 bits (192), Expect = 2e-38 Identities = 194/259 (75%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498 ||||||||| || | ||||| ||||| | | | || || ||||| |||||||| ||| Sbjct 45009452 TTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCTTGGTATGCGACCTTGGATTGCTGT 45009511 Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558 |||||| || || || || | || || | ||||||||| | || | ||| ||||||| Sbjct 45009512 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCCACCCAATCGGTCA 45009571 Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGT 176618 |||| ||| | ||||||||||||||| || || || |||| | ||| || ||| |||| Sbjct 45009572 AGGAAGTTTTTATGATGGTATGCCTCTAGGAATCTCTAGTACTTCCAATTTCATGATTGT 45009631 Query 176619 ATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGT 176678 |||||| || || ||||| || || ||||||||||| || ||| | || ||||| || || Sbjct 45009632 ATTCCAGGCTGAACACAAGATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGT 45009691 Query 176679 GTTTGGTGGATCTCTTTTC 176697 || || || || || ||| Sbjct 45009692 ATTCGGCGGCTCCCTATTC 45009710 Score = 114 bits (126), Expect = 2e-20 Identities = 121/157 (77%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 176911 ATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTC 176970 ||||||||||| || | ||| | |||| ||||| |||||||| || |||||||| ||| Sbjct 88349249 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTGAATGGTTTCAATTTC 88349308 Query 176971 AACCAGTCTGTCTTAGACAACTCTG-GTAAAGTGATTCCTACATGGGGAGATATCCTTAA 177029 ||||| ||||| | || | || | || | || ||| || |||| |||||| | || Sbjct 88349309 AACCAATCTGTAGTTGA-TAGTCAGTGTCATGTAATTAACACTTGGGCCGATATCATCAA 88349367 Query 177030 CCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGT 177066 |||||| | ||||||||||||||||||||| || ||| Sbjct 88349368 CCGTGCTAGCCTTGGTATGGAAGTTATGCATGAACGT 88349404 >seq5 Length=65875088 Score = 170 bits (188), Expect = 2e-37 Identities = 275/393 (70%), Gaps = 2/393 (1%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | || || | | ||| Sbjct 14606530 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTC-TGTA 14606472 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| |||| || ||||| || || || || || || || |||||||| ||||| || Sbjct 14606471 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTT 14606412 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 |||| |||||||| || ||||||||||| || || || || | | || | || Sbjct 14606411 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 14606352 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || |||| || |||||||| |||||||| ||| ||||||| |||||| | ||| Sbjct 14606351 GCTATAGGTTTACATTTTTACCCAATGTGGGAAGCGGCATCAGTTGATGAATGGTTATAC 14606292 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 || || || || || |||| |||| | ||||| | | || | | ||||||| Sbjct 14606291 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTATTACTTGGCGTAGCTTGTTACATG 14606232 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || | | ||||| ||||| | | | || || ||||| |||||||| ||||||||| Sbjct 14606231 GGTCATGAGTGGGAGCTTAGCTTCTGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 14606172 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTC 176538 || || || || | || || | ||||||||| Sbjct 14606171 TCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTC 14606139 >seq11 Length=56302525 Score = 136 bits (150), Expect = 5e-27 Identities = 205/290 (71%), Gaps = 10/290 (3%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || || ||||| ||| | || | || || | | || || || Sbjct 13390629 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCAAGGCCG 13390570 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 ||||||| ||| ||||| || || || || ||||| || ||||| | |||| | ||| Sbjct 13390569 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTTTATGTCTTAT 13390510 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGA-----CAAAGAAGAAAGAACTT 19469 || |||| || || |||||| | | || ||| || ||||||| | ||| Sbjct 13390509 AGATTTACCCGTTGTTGATTGGAAGTTAAA--AACTGATATTCCAAAGAAACGATTGCTT 13390452 Query 19470 AGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGC 19529 | |||| || || ||||| |||||| || || ||||| ||||| ||||||||| Sbjct 13390451 A---ATTACAGTATTGATTTTGGTATATGTATATTTTGTGGTAATTGCGTTGAGTATTGC 13390395 Query 19530 CCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||||| ||| |||| ||||| |||||||||||||| |||| | ||| Sbjct 13390394 CCAACAAATTGTTTATCAATGACCGAAGAATATGAATTTTCTACTTATGA 13390345 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 176548 CCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAAC 176607 ||| ||||||||||| ||| ||| ||||||||||||| || | || ||||| ||||| Sbjct 7156274 CCAATCGGTCAAGGAAGTTTTTCTAATGGTATGCCTCTAGGAGTCTCTGGTACTTTCAAT 7156333 Query 176608 TTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGA 176667 || ||| |||||||||| || || |||||||| || |||||| |||| |||||| | || Sbjct 7156334 TTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACTCATTTCATATGTTAGGC 7156393 Query 176668 GTAGCAGGTGTGTTTGGTGGATCTCTTTTC 176697 ||||| | || ||||| || || || ||| Sbjct 7156394 GTAGCTAGGGTATTTGGCGGCTCCCTATTC 7156423 Score = 125 bits (138), Expect = 9e-24 Identities = 191/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 176596 GGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTC 176655 ||||| ||||| || ||| |||||||||| || ||||||||||| || ||||||||||| Sbjct 45374585 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 45374526 Query 176656 CATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGT 176715 || || | || |||| ||||| || || || || ||| || ||||| | Sbjct 45374525 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCC 45374466 Query 176716 CTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTAC 176775 | || || ||| | | || || | || ||||| ||||| || | |||||| Sbjct 45374465 TTGGTAACATCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTAC 45374406 Query 176776 AAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGT 176835 | |||||| ||||| ||||| || || || || ||||| | || | ||| ||||| | Sbjct 45374405 AGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGTTCATGCTTATTTTGGCGGA 45374346 Query 176836 CTTATCTTCCAGTATGCTTCTTTCAATAACTC 176867 | |||||||| |||||| |||||| ||||| Sbjct 45374345 TTGATCTTCCAATATGCTAGTTTCAACAACTC 45374314 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 176936 GCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTG 176995 |||| ||||| |||||||| || |||||||| |||||||| ||||| | |||| | Sbjct 9104325 GCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGG 9104266 Query 176996 GTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAA 177051 || || ||| || |||| |||||| | |||||||| ||||||||||||||| Sbjct 9104265 GTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAA 9104210 Score = 87.8 bits (96), Expect = 2e-12 Identities = 166/242 (69%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 176741 AGACAACCGAAAA--CGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGAC 176798 || |||| ||||| |||||| || | |||||| |||| | ||||| ||| | || Sbjct 54981845 AGCCAACAGAAAAGTCGAATCTTCGAATGAATGTTACATATTCTGTCAAGAGGAAAAAAC 54981786 Query 176799 ATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTT 176858 || || ||||||| | || ||||| ||||| | | |||| || |||| | ||| Sbjct 54981785 TTATAATATTGTAGTCGTTCATGGTTATTTTGGCTGATTGATCTACCGATATGTTAGTTT 54981726 Query 176859 CAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTT 176918 |||| |||| | | |||||||||||||| || | | | || | |||||||| Sbjct 54981725 CAATGACTCTCGTTCGTTACACTTCTTCCTTGCTGCTTGGCATATAGTAGGTATCTGGTT 54981666 Query 176919 TACTGC-AATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGT 176977 ||| || | ||| || |||| ||| ||||| || || ||||||| |||| ||| | Sbjct 54981665 TACCGCTTTTAGGTATTAGCACTATGCTTTTCAATCTAAATAGTTTCAATTTCAGCCAAT 54981606 Query 176978 CT 176979 || Sbjct 54981605 CT 54981604 >seq3 Length=70787664 Score = 116 bits (128), Expect = 4e-21 Identities = 120/156 (77%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 176936 GCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTG 176995 |||| ||||| |||||||| || |||||||| |||||||| ||| | | |||| | Sbjct 48907268 GCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGACAGTCAGG 48907209 Query 176996 GTAAAGTGA-TTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTT 177054 || || | || || |||| |||||| | |||||||| ||||||||||||||| || Sbjct 48907208 GTCGTGTAAATTAAAACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAATTT 48907149 Query 177055 ATGCACGAGCGTAATGCTCACAACTTCCCACTTGAC 177090 ||||| || || |||||||| |||||||| || ||| Sbjct 48907148 ATGCATGAACGCAATGCTCATAACTTCCCTCTAGAC 48907113 >seq12 Length=67145203 Score = 113 bits (124), Expect = 5e-20 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498 ||||||||| | | ||||| ||||| | | | || || ||||| |||||||| ||| Sbjct 45738429 TTACATGGGTCATGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGT 45738370 Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558 |||||| || || || || || || | ||||||||| | |||| ||| ||||||| Sbjct 45738369 TGCATATTCAGCTCCTGTTGTAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCA 45738310 Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTAC 176600 |||| ||| ||||||||||||||||| || || || ||||| Sbjct 45738309 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 45738268 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 177010 ACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAAT 177069 || |||| |||||| | |||||| | ||||||||||| ||||||||||| || |||| | Sbjct 54273819 ACTTGGGCTGATATCATCAACCGTTCTAACCTTGGTATTGAAGTTATGCATGAACGTATT 54273878 Query 177070 GCTCACAACTTCCCACTTGACCTTGCTGCT 177099 ||||| |||||||| || ||||| |||||| Sbjct 54273879 GCTCATAACTTCCCTCTAGACCTAGCTGCT 54273908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603470675126400