Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq3145 545 3e-150
seq2 338 8e-88
seq1 174 2e-38
seq5 170 2e-37
seq11 136 5e-27
seq3 116 4e-21
seq12 113 5e-20
>seq3145
Length=155461
Score = 545 bits (604), Expect = 3e-150
Identities = 695/954 (73%), Gaps = 2/954 (0%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 1516 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTC-TGTA 1458
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| |||| || ||||| || || || || || || || |||||||| ||||| ||
Sbjct 1457 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTT 1398
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
|||| |||||||| || ||||||||||| || || || || | | || | ||
Sbjct 1397 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1338
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || |||| || ||||||||||||||||| ||| | ||||| |||||| | |||
Sbjct 1337 GCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATAC 1278
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
|| || || || || |||| |||| | |||||| | | || | | |||||||
Sbjct 1277 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATG 1218
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | ||||| ||||| | | | || || ||||| |||||||| |||||||||
Sbjct 1217 GGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 1158
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | || || | ||||||||| | |||| ||| ||||||||||| |
Sbjct 1157 TCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCAAGGAAGT 1098
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|| ||||||||||||||||| || || || ||||| ||||| || ||| ||||||||||
Sbjct 1097 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAG 1038
Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685
|| || |||||||| || ||||||||||| || ||| | || ||||| || || || ||
Sbjct 1037 GCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGC 978
Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745
|| || || ||| || ||||| || | || |||||| | | || || ||
Sbjct 977 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 918
Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805
|| ||||| ||||| || | ||||||| |||||| ||||| ||||| || || ||
Sbjct 917 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 858
Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865
|| ||||| || || ||||| ||||| || | |||||||| |||||| |||||| |||
Sbjct 857 ATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAC 798
Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925
|| | | ||||||||||| || || | || || || | ||||||||||| ||
Sbjct 797 TCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCT 738
Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985
| ||| | |||| ||||| |||||||| || |||||||| |||||||| ||||| |
Sbjct 737 TTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTT 678
Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045
|||| ||| || ||| || |||| |||||| | |||||||| |||||||||
Sbjct 677 GACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGT 618
Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099
|||||||||||||| || ||||||||||| |||||||| || ||||| ||||||
Sbjct 617 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 564
Score = 143 bits (158), Expect = 3e-29
Identities = 205/287 (71%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || || || ||||| ||| | || | || || | | ||| || ||
Sbjct 120918 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCG 120859
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
||||||| ||| ||||| || || || || ||||| || ||||| | ||||| |||||
Sbjct 120858 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTGTATGTCCTAT 120799
Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAGA 19472
|| |||| || || |||||| | || | ||| || | |||||| | |
Sbjct 120798 AGATTTACCCGTTGTTGATTGGAAGTTGGA--AACTGATATTCGAAAGAAACGATTGCTT 120741
Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532
||||| || || |||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct 120740 AATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGCCCA 120681
Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579
||||| ||| |||| ||||| |||||||||||| | |||| | |||
Sbjct 120680 ACAAATTGTTTATCAATGACCGAAGAATATGAACTTTCTACTTATGA 120634
>seq2
Length=55340444
Score = 338 bits (374), Expect = 8e-88
Identities = 656/959 (68%), Gaps = 12/959 (1%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTC-ACTGCTGCAGCATGT 176205
||||| || | | |||||| || ||||||| |||| || | || || | | |||
Sbjct 13824713 TTTACATTTGATTGTTTGGGGTTTTCATGAT-CCATACCTTATTGACGGCAACTTC-TGT 13824656
Query 176206 -TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGT 176264
||||| |||| || |||| || || | || || || |||||||| ||||| |
Sbjct 13824655 ATTTATTATTGCCTTCATTGATGCTTGTCCAGCAGACATTGATGGTATTCGTGAACCTTT 13824596
Query 176265 AGCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAA 176324
|| | | |||||| || | ||||||||| || || || || | | || | ||
Sbjct 13824595 TTCAAGGTTTCTACTTTACGAAAACAACATTATTTCCGGTGCGATTATTCCTACTTCTGC 13824536
Query 176325 CGCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTA 176384
|| || || |||| || |||||||| | ||| || ||| | || | |||||| | ||
Sbjct 13824535 AGCTATAGGTTTACATTTTTACCCAATTTAGGATGCGGCATCCATTTATGAATGGTTATA 13824476
Query 176385 CAATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACAT 176444
||| | || || |||| || | | |||||| || | || | || |||||
Sbjct 13824475 CAACGATGGTTATTATGAACTAATTTTTCTACACTTCTTTCTTGGCGTATCCTGTTACAA 13824416
Query 176445 GGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATA 176504
||| || | ||||| ||||| | | | ||||| ||| | |||||||| |||||||||
Sbjct 13824415 GGGTCGTGATTGGGAGCTTAGCTTCCGTCTAGGTATGAGACCTTGGATTGTTGTTGCATA 13824356
Query 176505 CTCTGCACCAGT---ATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGG 176561
| || || || |||||| | | || ||||||| |||| ||| |||||||||
Sbjct 13824355 TTAAGCTCCTGTTAGATCTGCTACCA---CAATTTTCCTTATCTACCCAATCGGTCAAGC 13824299
Query 176562 ATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATT 176621
| || ||||||||||||||||| || || || | || ||||| || ||| |||||||
Sbjct 13824298 AAACTTTTCTGATGGTATGCCTCTAGGAATCTCTTGCACTTTCAATTTCATGATTGTATT 13824239
Query 176622 CCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTT 176681
||| || || ||||||| || ||||||||||| || ||| | || ||||| | || ||
Sbjct 13824238 CCAGGCCGAATACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTAGGGTATT 13824179
Query 176682 TGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGA 176741
| || || || || || | | | || | |||| |||||| | | || ||
Sbjct 13824178 CGACGGCTCACTATTTAGTGCCACGTATGGTAACTTTGTAACTTCTAGTTTGATCAGGGA 13824119
Query 176742 GACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATA 176801
|| | ||||| ||||| || | |||| | |||| | ||||| ||||| || ||
Sbjct 13824118 AACCATAGAAAATGAATCTGCCAATAAATGTTAAAGATTCAGTCAAGAGGAAGAAACTTA 13824059
Query 176802 CAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAA 176861
|| ||||||| || || |||| ||||| | | ||||| || |||||| ||||||
Sbjct 13824058 TAATATTGTAGACGCTCATGGTTGTTTTGGCCTATTGATCTTTCAATATGCTAGTTTCAA 13823999
Query 176862 TAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTAC 176921
|| || | | ||||||||| | || || || || | | |||||||||||
Sbjct 13823998 CAAATCTCGTTCGTTACACTTCTTCTTAGCCGCTAGGCCTGTATTAGGTATCTGGTTTAC 13823939
Query 176922 TGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGT 176981
|| | ||| | |||| ||||| |||||||| || ||||||| |||||||| |||||
Sbjct 13823938 CGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATTGTTTCAATTTCAACCAATCTGT 13823879
Query 176982 CTTAGACAACTCTG-GTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACC 177040
| || | || | || || || || |||| |||||| | |||||||| ||||
Sbjct 13823878 ACTTGA-TAGTCAGTGTCGTGTAATCAACACTTGGGCTGATATCATCAACCGTGCTAACC 13823820
Query 177041 TTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099
|| ||||| |||||||||| || || |||||| | |||||||| || ||||| ||||||
Sbjct 13823819 TTAGTATGAAAGTTATGCATGAACGGAATGCTAATAACTTCCCTCTAGACCTAGCTGCT 13823761
Score = 122 bits (134), Expect = 1e-22
Identities = 190/272 (70%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 176596 GGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTC 176655
||||| ||||| || ||| |||||||||| | ||||||||||| | |||||||||||
Sbjct 12930168 GGTACTTTCAATTTCATGATTGTATTCCAGCCCGAGCACAACATCCATATGCACCCATTT 12930227
Query 176656 CATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGT 176715
|| || | || |||| ||||| ||||| || || |||| || ||||| |
Sbjct 12930228 CACATCTTAGGCCTAGCTGGTGTAAAAGGTGGCTCCCTATTCTATGCTATGCATGCTTCC 12930287
Query 176716 CTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTAC 176775
| || || | | | || || || | || ||||| ||||| || | ||||||
Sbjct 12930288 TTGGTAACATTTAGTTTGGTCAGGGAAAGCACTGAAAATGAATCTGCTAATGAAGGTTAC 12930347
Query 176776 AAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGT 176835
||||| | ||| | ||| | ||||| || || ||||| | || | ||| ||||| ||
Sbjct 12930348 AAATTTGTTCAAAAGGAAAAAACATAGAATATCGTAGCCTCTCATGCTTATTTTGGCCGA 12930407
Query 176836 CTTATCTTCCAGTATGCTTCTTTCAATAACTC 176867
| |||||||| |||||| |||||| |||||
Sbjct 12930408 TTGATCTTCCAATATGCTAGTTTCAACAACTC 12930439
Score = 116 bits (128), Expect = 4e-21
Identities = 117/152 (77%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 176911 ATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTC 176970
||||||||||| || | ||| | |||| ||||| |||||||| || |||||||| |||
Sbjct 22405073 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 22405014
Query 176971 AACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAAC 177030
||||| ||||| | |||| ||| || ||| || |||| |||||| | |||
Sbjct 22405013 AACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAAC 22404954
Query 177031 CGTGCAAACCTTGGTATGGAAGTTATGCACGA 177062
||||| ||||||||||||||||||||||| ||
Sbjct 22404953 CGTGCTAACCTTGGTATGGAAGTTATGCAAGA 22404922
>seq1
Length=98543444
Score = 174 bits (192), Expect = 2e-38
Identities = 194/259 (75%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498
||||||||| || | ||||| ||||| | | | || || ||||| |||||||| |||
Sbjct 45009452 TTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCTTGGTATGCGACCTTGGATTGCTGT 45009511
Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558
|||||| || || || || | || || | ||||||||| | || | ||| |||||||
Sbjct 45009512 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCCACCCAATCGGTCA 45009571
Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGT 176618
|||| ||| | ||||||||||||||| || || || |||| | ||| || ||| ||||
Sbjct 45009572 AGGAAGTTTTTATGATGGTATGCCTCTAGGAATCTCTAGTACTTCCAATTTCATGATTGT 45009631
Query 176619 ATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGT 176678
|||||| || || ||||| || || ||||||||||| || ||| | || ||||| || ||
Sbjct 45009632 ATTCCAGGCTGAACACAAGATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGT 45009691
Query 176679 GTTTGGTGGATCTCTTTTC 176697
|| || || || || |||
Sbjct 45009692 ATTCGGCGGCTCCCTATTC 45009710
Score = 114 bits (126), Expect = 2e-20
Identities = 121/157 (77%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 176911 ATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTC 176970
||||||||||| || | ||| | |||| ||||| |||||||| || |||||||| |||
Sbjct 88349249 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTGAATGGTTTCAATTTC 88349308
Query 176971 AACCAGTCTGTCTTAGACAACTCTG-GTAAAGTGATTCCTACATGGGGAGATATCCTTAA 177029
||||| ||||| | || | || | || | || ||| || |||| |||||| | ||
Sbjct 88349309 AACCAATCTGTAGTTGA-TAGTCAGTGTCATGTAATTAACACTTGGGCCGATATCATCAA 88349367
Query 177030 CCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGT 177066
|||||| | ||||||||||||||||||||| || |||
Sbjct 88349368 CCGTGCTAGCCTTGGTATGGAAGTTATGCATGAACGT 88349404
>seq5
Length=65875088
Score = 170 bits (188), Expect = 2e-37
Identities = 275/393 (70%), Gaps = 2/393 (1%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 14606530 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTC-TGTA 14606472
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| |||| || ||||| || || || || || || || |||||||| ||||| ||
Sbjct 14606471 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTT 14606412
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
|||| |||||||| || ||||||||||| || || || || | | || | ||
Sbjct 14606411 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 14606352
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || |||| || |||||||| |||||||| ||| ||||||| |||||| | |||
Sbjct 14606351 GCTATAGGTTTACATTTTTACCCAATGTGGGAAGCGGCATCAGTTGATGAATGGTTATAC 14606292
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
|| || || || || |||| |||| | ||||| | | || | | |||||||
Sbjct 14606291 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTATTACTTGGCGTAGCTTGTTACATG 14606232
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| | | ||||| ||||| | | | || || ||||| |||||||| |||||||||
Sbjct 14606231 GGTCATGAGTGGGAGCTTAGCTTCTGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 14606172
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTC 176538
|| || || || | || || | |||||||||
Sbjct 14606171 TCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTC 14606139
>seq11
Length=56302525
Score = 136 bits (150), Expect = 5e-27
Identities = 205/290 (71%), Gaps = 10/290 (3%)
Strand=Plus/Minus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || || || ||||| ||| | || | || || | | || || ||
Sbjct 13390629 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCAAGGCCG 13390570
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
||||||| ||| ||||| || || || || ||||| || ||||| | |||| | |||
Sbjct 13390569 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTTTATGTCTTAT 13390510
Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGA-----CAAAGAAGAAAGAACTT 19469
|| |||| || || |||||| | | || ||| || ||||||| | |||
Sbjct 13390509 AGATTTACCCGTTGTTGATTGGAAGTTAAA--AACTGATATTCCAAAGAAACGATTGCTT 13390452
Query 19470 AGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGC 19529
| |||| || || ||||| |||||| || || ||||| ||||| |||||||||
Sbjct 13390451 A---ATTACAGTATTGATTTTGGTATATGTATATTTTGTGGTAATTGCGTTGAGTATTGC 13390395
Query 19530 CCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579
|||||||| ||| |||| ||||| |||||||||||||| |||| | |||
Sbjct 13390394 CCAACAAATTGTTTATCAATGACCGAAGAATATGAATTTTCTACTTATGA 13390345
Score = 127 bits (140), Expect = 2e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 176548 CCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAAC 176607
||| ||||||||||| ||| ||| ||||||||||||| || | || ||||| |||||
Sbjct 7156274 CCAATCGGTCAAGGAAGTTTTTCTAATGGTATGCCTCTAGGAGTCTCTGGTACTTTCAAT 7156333
Query 176608 TTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGA 176667
|| ||| |||||||||| || || |||||||| || |||||| |||| |||||| | ||
Sbjct 7156334 TTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACTCATTTCATATGTTAGGC 7156393
Query 176668 GTAGCAGGTGTGTTTGGTGGATCTCTTTTC 176697
||||| | || ||||| || || || |||
Sbjct 7156394 GTAGCTAGGGTATTTGGCGGCTCCCTATTC 7156423
Score = 125 bits (138), Expect = 9e-24
Identities = 191/272 (70%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 176596 GGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTC 176655
||||| ||||| || ||| |||||||||| || ||||||||||| || |||||||||||
Sbjct 45374585 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 45374526
Query 176656 CATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGT 176715
|| || | || |||| ||||| || || || || ||| || ||||| |
Sbjct 45374525 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCC 45374466
Query 176716 CTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTAC 176775
| || || ||| | | || || | || ||||| ||||| || | ||||||
Sbjct 45374465 TTGGTAACATCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTAC 45374406
Query 176776 AAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGT 176835
| |||||| ||||| ||||| || || || || ||||| | || | ||| ||||| |
Sbjct 45374405 AGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGTTCATGCTTATTTTGGCGGA 45374346
Query 176836 CTTATCTTCCAGTATGCTTCTTTCAATAACTC 176867
| |||||||| |||||| |||||| |||||
Sbjct 45374345 TTGATCTTCCAATATGCTAGTTTCAACAACTC 45374314
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 176936 GCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTG 176995
|||| ||||| |||||||| || |||||||| |||||||| ||||| | |||| |
Sbjct 9104325 GCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGG 9104266
Query 176996 GTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAA 177051
|| || ||| || |||| |||||| | |||||||| |||||||||||||||
Sbjct 9104265 GTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAA 9104210
Score = 87.8 bits (96), Expect = 2e-12
Identities = 166/242 (69%), Gaps = 3/242 (1%)
Strand=Plus/Minus
Query 176741 AGACAACCGAAAA--CGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGAC 176798
|| |||| ||||| |||||| || | |||||| |||| | ||||| ||| | ||
Sbjct 54981845 AGCCAACAGAAAAGTCGAATCTTCGAATGAATGTTACATATTCTGTCAAGAGGAAAAAAC 54981786
Query 176799 ATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTT 176858
|| || ||||||| | || ||||| ||||| | | |||| || |||| | |||
Sbjct 54981785 TTATAATATTGTAGTCGTTCATGGTTATTTTGGCTGATTGATCTACCGATATGTTAGTTT 54981726
Query 176859 CAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTT 176918
|||| |||| | | |||||||||||||| || | | | || | ||||||||
Sbjct 54981725 CAATGACTCTCGTTCGTTACACTTCTTCCTTGCTGCTTGGCATATAGTAGGTATCTGGTT 54981666
Query 176919 TACTGC-AATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGT 176977
||| || | ||| || |||| ||| ||||| || || ||||||| |||| ||| |
Sbjct 54981665 TACCGCTTTTAGGTATTAGCACTATGCTTTTCAATCTAAATAGTTTCAATTTCAGCCAAT 54981606
Query 176978 CT 176979
||
Sbjct 54981605 CT 54981604
>seq3
Length=70787664
Score = 116 bits (128), Expect = 4e-21
Identities = 120/156 (77%), Gaps = 1/156 (1%)
Strand=Plus/Minus
Query 176936 GCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTG 176995
|||| ||||| |||||||| || |||||||| |||||||| ||| | | |||| |
Sbjct 48907268 GCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGACAGTCAGG 48907209
Query 176996 GTAAAGTGA-TTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTT 177054
|| || | || || |||| |||||| | |||||||| ||||||||||||||| ||
Sbjct 48907208 GTCGTGTAAATTAAAACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAATTT 48907149
Query 177055 ATGCACGAGCGTAATGCTCACAACTTCCCACTTGAC 177090
||||| || || |||||||| |||||||| || |||
Sbjct 48907148 ATGCATGAACGCAATGCTCATAACTTCCCTCTAGAC 48907113
>seq12
Length=67145203
Score = 113 bits (124), Expect = 5e-20
Identities = 122/162 (75%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498
||||||||| | | ||||| ||||| | | | || || ||||| |||||||| |||
Sbjct 45738429 TTACATGGGTCATGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGT 45738370
Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558
|||||| || || || || || || | ||||||||| | |||| ||| |||||||
Sbjct 45738369 TGCATATTCAGCTCCTGTTGTAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCA 45738310
Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTAC 176600
|||| ||| ||||||||||||||||| || || || |||||
Sbjct 45738309 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 45738268
Score = 95.1 bits (104), Expect = 1e-14
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 177010 ACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAAT 177069
|| |||| |||||| | |||||| | ||||||||||| ||||||||||| || |||| |
Sbjct 54273819 ACTTGGGCTGATATCATCAACCGTTCTAACCTTGGTATTGAAGTTATGCATGAACGTATT 54273878
Query 177070 GCTCACAACTTCCCACTTGACCTTGCTGCT 177099
||||| |||||||| || ||||| ||||||
Sbjct 54273879 GCTCATAACTTCCCTCTAGACCTAGCTGCT 54273908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603470675126400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |