Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq11 181 2e-40
seq10 156 1e-32
seq12 143 6e-29
seq7 141 2e-28
seq1 132 1e-25
>seq11
Length=56302525
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||||||||| |||||||||||||||||||||||||| || | |||| |||||
Sbjct 496545 GAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATC 496486
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || |||||| || ||||| || |||||||| || | | || |||||||| ||
Sbjct 496485 TTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTTGTC 496426
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||| || ||||||| | || | | |||| |||||||| || |||||||| || ||
Sbjct 496425 TTGAATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCAACCTCAAGAGTGATGGT 496366
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| || || | ||||||
Sbjct 496365 CTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 496333
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| ||||| || ||||| ||||||||||||||||| || | |||| ||||||
Sbjct 496772 AGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCT 496713
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| |||||||||||||| | | || |||||||| |||
Sbjct 496712 TCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCT 496653
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|||||||| ||||||| | || | | ||||||| ||||| || |||||||| |||||
Sbjct 496652 TGAATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTC 496593
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || |||| |||||
Sbjct 496592 TTTCCGGTCAGAGTTTTAACAAAGATTTGCAT 496561
Score = 165 bits (182), Expect = 2e-35
Identities = 153/194 (79%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| ||||| || ||||| ||||||||||||||||| | | |||| ||||||
Sbjct 487300 AGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGTAAGTGTTCGGCCATCT 487359
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| |||||||||||||| | || || |||||||| |||
Sbjct 487360 TCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGAAATACCTTCCTTGTCT 487419
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
| |||||| ||||||| | || | | ||||||| ||||| || |||||||| |||||
Sbjct 487420 TCAATTTTAGCTTTGACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGAGTTATAGTC 487479
Query 152073 TTGCCCGTGAGAGT 152086
|| || || |||||
Sbjct 487480 TTTCCGGTCAGAGT 487493
Score = 140 bits (154), Expect = 7e-28
Identities = 161/214 (75%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||||||||| || |||||||| | ||||||||||||||| || | ||| |||||
Sbjct 487515 GAGGACAAGATGGAG-GTAGACTCGTCTTGGATGTTGTAATCAGCAACTGTTTGGCCATC 487573
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || |||||| || ||||| ||||||||||| || | | || |||||||| ||
Sbjct 487574 TTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTC 487633
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||| || ||| ||| | || |||| || ||||| || |||||||| || ||
Sbjct 487634 TTGAATCTTAGCTTTTACATTATCACTAGTGTCAGAGCTCTCGACCTCAAGAGTGATGGT 487693
Query 152072 TTTGCCCGTGAGAGTCTT-CACGAAGACCTGCAT 152104
|| || ||||| ||||| || || | ||||||
Sbjct 487694 CTTTCCGGTGAGCGTCTTAAACAAATATCTGCAT 487727
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| || |||||||||||||||||||||||||| |||||||| || || || | || |
Sbjct 497919 GAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTGCG 497860
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| |||||||| || || | | ||| |||||
Sbjct 497859 GCCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTC 497800
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || ||| ||| ||| | || | | || || ||||| || || | ||
Sbjct 497799 CTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCAATGT 497740
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||||||||| |||| ||||||
Sbjct 497739 GATTGTCTTCCCAGTAAGAGTCTTCACAAAGATCTGCAT 497701
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||| ||||| ||||| || ||||||||||| || || | ||| |||||||| ||
Sbjct 497681 ACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCATCCTCA 497622
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| ||| || || ||||| | | ||| ||||| | | || || ||||| ||||||
Sbjct 497621 AGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGA 497562
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| ||| ||| ||| | || | | | ||||||||||| || || | || || || ||
Sbjct 497561 ATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTGATTGTCTTC 497502
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | ||||||||| |||| ||||||
Sbjct 497501 CCAGTCAAAGTCTTCACAAAGATCTGCAT 497473
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| |||| || |||||||| | ||||||||||| || || ||||| || || | ||
Sbjct 497010 CCTCAGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCCAGGGT 496951
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|| ||||| || || || ||||| ||||| || ||||||||||| | | || ||
Sbjct 496950 CCTTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCC 496891
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
|||||| || |||||||| || ||| | || | | || ||||| || ||||||||
Sbjct 496890 TTCCTTATCCTGAATTTTGGCCTTCACATTGTCAATAGTATCGGAACTTTCAACTTCAAG 496831
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || ||||| || |||| ||||||
Sbjct 496830 GGTGATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTGCAT 496789
Score = 118 bits (130), Expect = 2e-21
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| |||||||| |||||||||||||||||||| ||||| ||||| || || | | |
Sbjct 486370 GAGCCTGAGGACGAGATGAAGAGTAGACTCTTTGTGGATATTGTAGTCTGCAAGGATGCG 486429
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || |||||||||||| | || || | | || | |||
Sbjct 486430 ACCATCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCCGTTGATCTGGTGGAATCCTTTC 486489
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||| |||||| || | ||||| |||| || || | ||
Sbjct 486490 CTTGTCCTGTATCCTTGCTTTCACAGTCAGTA--GTATCTGAGCTCTTAACCTCCAATGT 486547
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||||||||| |||| ||||||
Sbjct 486548 GATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 486586
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||| ||||| ||||| || ||||||||||| || || | ||| ||||| || ||
Sbjct 497453 ACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCGTCCTCA 497394
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| ||| || || ||||| | | ||| ||||| | | || || ||||| ||||||
Sbjct 497393 AGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGA 497334
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| ||| ||| ||| | || | | | ||||||||||| || || | ||||| || ||
Sbjct 497333 ATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGTCTTC 497274
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | |||||| || || | |||||
Sbjct 497273 CCAGTCAAAGTCTTGACAAAAATTTGCAT 497245
Score = 111 bits (122), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || || ||||| || ||||||||||| || || || || |||||
Sbjct 497228 AGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATCC 497169
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || || ||||| | ||||||||||| | | || || ||||| |
Sbjct 497168 TCAAGTTGCTTT--CCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGT 497111
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
|||| || ||| ||| ||| | || | | ||||||||||| || || | |||||| |
Sbjct 497110 CTTGTATCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTG 497051
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || | ||||| || || | |||||
Sbjct 497050 TCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 497017
Score = 104 bits (114), Expect = 5e-17
Identities = 151/212 (71%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| | || |||||||| || || ||||| || || | || || |||||
Sbjct 487073 AGAACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATCC 487132
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || |||| ||||| || ||||||||||| | | || |||||||| ||
Sbjct 487133 TCAAGTTGCTTGCCGGA-AAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCC 487191
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|||||||| || || | || | | |||||||| || |||||||| || || ||
Sbjct 487192 TGAATTTTGGTCTTCACGTTGTCAATTGTATCTGAACTTTCAACTTCAAGGGTGATGGTC 487251
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || ||| ||||||
Sbjct 487252 TTTCCAGTAAGTGTCTTGACAGAGATCTGCAT 487283
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/203 (70%), Gaps = 5/203 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || |||| ||| || ||||||||||| || || | || ||||||
Sbjct 486844 AGAACAAGGTGCAGCGTTGACTGTTTCTGAATGTTGTAATCTGCCAAGATCCTTCCATCT 486903
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT- 152009
|| || ||| | || || || || | |||| ||||| || | || || ||||||
Sbjct 486904 TCAAGTTGCTCT--CCAGCAAACATCAATCTCTACTGGTTCGGAGGAATACCCTCCTTTG 486961
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
||||| | ||| ||| ||| | | | | | ||||||||||| || || | ||||||
Sbjct 486962 TCTTGGACCTTTGCTTTAACATTGTTGATGGTATCTGAACTCTCAACCTCCAAAGTAATT 487021
Query 152070 GTTTTGCCCGTGAGAGTCTTCAC 152092
|| || || || | ||||| ||
Sbjct 487022 GTCTTCCCTGTCAATGTCTTAAC 487044
>seq10
Length=65527505
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || | ||||||||| |||||||||||||| || || | ||| ||
Sbjct 1071361 GAGACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCT 1071420
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || ||||| || ||||| || ||||||||||||| | |||||| ||
Sbjct 1071421 TCCATCTTCAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTC 1071480
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || |||||||| || ||| | || | | | || |||||||| || || | |||
Sbjct 1071481 CTTGTCCTGAATTTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGT 1071540
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || | |||||||| || | ||||||
Sbjct 1071541 TATGGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 1071579
Score = 131 bits (144), Expect = 4e-25
Identities = 157/210 (75%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| |||||||| || ||||||||||| |||| ||| | || ||||| |
Sbjct 1072513 CAAG-TGGAGAGTTGACTCTTTCTGAATGTTGTAATCAGCTAGAGTACGACCGTCTTCAA 1072571
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| || || ||||| |||||||||||||| | | || |||||||| || ||
Sbjct 1072572 GCTGCTTT--CCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTG 1072629
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || ||| ||| | || | | ||||||| || || || ||||| || ||||| ||
Sbjct 1072630 GATCTTGGCTTTAACATTGTCAATGGTGTCTGAGCTTTCCACCTCAAGGGTGATAGTCTT 1072689
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || || || | ||||||
Sbjct 1072690 TCCAGTGAGGGTTTTAACAAATATCTGCAT 1072719
Score = 127 bits (140), Expect = 5e-24
Identities = 162/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| || | ||||||||||| || || || || || || |||||||||||||| ||
Sbjct 1071586 CCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCTAATGT 1071645
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|| |||||||| | || || || || || | ||| |||||||| | | ||| ||
Sbjct 1071646 CCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACC 1071705
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
|| || || ||||| || || || | || | | |||| || || || || |||||
Sbjct 1071706 CTCTTTGTCCTGAATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTCCACCTCAAG 1071765
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|||||||| ||||| || | ||||||||||||| ||||||
Sbjct 1071766 GGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATT 1071808
Score = 120 bits (132), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||||| || ||||| || |||||||||||||| || | || | || ||
Sbjct 1071824 AGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGGCCGTCC 1071883
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| ||||| ||||| | |||||||||||| | | || ||||| || |
Sbjct 1071884 TCAAGTTGCTTT--CCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGT 1071941
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| |||||||| || ||| | || | | |||| ||||| || || ||||| || || |
Sbjct 1071942 CCTGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTGATTG 1072001
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || | |||||||| |||| |||||
Sbjct 1072002 TCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 1072035
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||||| || ||||| || |||||||||||||| || | || || || ||
Sbjct 1072052 AGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCC 1072111
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| | ||| |||||||| | | || |||||||| |||
Sbjct 1072112 TCAAGCTGCTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 1072171
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| | || | | |||| || || || || ||||| || || ||
Sbjct 1072172 TGGATCTTAGCCTTAACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTC 1072231
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || | ||||||||| || | ||||||
Sbjct 1072232 TTTCCAGTCAAAGTCTTCACAAAAATTTGCATT 1072264
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || || || || |||||||||||||| || | || || || || || |
Sbjct 1072285 CAAG-TGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCCTCAA 1072343
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| | ||| |||||||| | | || |||||||| ||||| |
Sbjct 1072344 GCTGCTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGA 1072403
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | || | | |||| || || || || ||||| || || || || |
Sbjct 1072404 TCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTTC 1072463
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||| |||||||| | |||||
Sbjct 1072464 CTGTCAAAGTTTTCACGAAAATTTGCAT 1072491
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| || || ||||| |||||||| || ||||| || ||||||||||| || | ||
Sbjct 463806 CCTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCCAGGGT 463865
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
||| |||||||| | ||| || || || || || |||||||| || | | || ||
Sbjct 463866 TCTACCATCTTCCAATTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGTATGCC 463925
Query 152003 TTCCTTTTCTTG 152014
||| || || ||
Sbjct 463926 TTCTTTATCCTG 463937
>seq12
Length=67145203
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || || || ||||| || ||||||||||| || |||| ||||
Sbjct 66287149 GAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCG 66287208
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || |||||||| || | | ||||||||| | | || |||||
Sbjct 66287209 GCCATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTC 66287268
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || || ||| | || | | ||||||| |||||| || | ||
Sbjct 66287269 CTTGTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCCAAGGT 66287328
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || |||||||| || |||||||| |||| |||||||||
Sbjct 66287329 AATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 66287370
Score = 134 bits (148), Expect = 3e-26
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || || || || || || ||||||||||| || |||| |||| |||||
Sbjct 66338187 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCC 66338128
Query 151953 TCTAGGCT--TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || || ||||||| |||| || | |||||||||||| | | || |||||||| |
Sbjct 66338127 TCAAG-CTGCTTTCCCG-CGAAAATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGT 66338070
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| ||||| || || ||| | || | | | || || |||||| || | |||||||
Sbjct 66338069 CCTGAATCTTAGCCTTAACATTGTCAATGGTATCCGATGACTCTACCTCTAAGGTAATAG 66338010
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| |||||||| || |||||||| |||| |||||||||
Sbjct 66338009 TCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 66337973
>seq7
Length=68045021
Score = 141 bits (156), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | ||| || || ||||| || ||||||||||| || |||| || |
Sbjct 66406563 GAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCG 66406504
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|||||||| | ||||| || || ||||| | |||||||||||| | | || |||
Sbjct 66406503 GCCATCTTCCAACTGCTTT--CCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCT 66406446
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || ||||| | || | | ||||||| || || || |||||
Sbjct 66406445 TCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGG 66406386
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || |||||||||||||||||||||| ||||||
Sbjct 66406385 GTAATCGTCTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 66406345
Score = 132 bits (146), Expect = 1e-25
Identities = 163/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||||||||| || |||||||| || ||||||||||| || || | || |
Sbjct 66406791 GAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCG 66406732
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| || |||||||| | |||||||||||| | | ||| |||
Sbjct 66406731 ACCATCCTCGAGCTGCTTT--CCAGCGAAGATCAACCTCTGCTGGTCTGGGGGGATCCCT 66406674
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || || | || | | |||| || || || || || | |
Sbjct 66406673 TCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACCTCCAAA 66406614
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || |||||||| ||||||| ||||||
Sbjct 66406613 GTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 66406573
Score = 122 bits (134), Expect = 2e-22
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| || || ||||| || |||||||||||||| |||| ||| | || ||
Sbjct 66406329 GAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTC 66406270
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| | ||||| || |||||||||||||| ||||| |||| | |||||||||||
Sbjct 66406269 CTCCAACTGCTTT--CCAGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTA 66406212
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || || || || | || | | || ||||| || || || || || |||
Sbjct 66406211 TCCTGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATA 66406152
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||| ||||| |||| ||||||
Sbjct 66406151 GTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 66406117
Score = 122 bits (134), Expect = 2e-22
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || || || ||||| || ||||| ||||| || || | || |
Sbjct 66407475 GAGACGGAGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCG 66407416
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || ||||| || | |||||||||||| | | ||| || ||
Sbjct 66407415 GCCATCCTCAAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGTGGGATCCCCTC 66407356
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || ||| ||| | || | | |||| |||||||| || || | |||
Sbjct 66407355 CTTGTCCTGAATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGT 66407296
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || | |||||||| |||| |||||||
Sbjct 66407295 GATGGTCTTCCCGGTCAAGGTCTTCACAAAGATCTGCATT 66407256
Score = 113 bits (124), Expect = 1e-19
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || || || || | || || || ||||| ||||||||||| || || || |||||
Sbjct 66407250 CCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTATAGTCCGCCAAAGT 66407191
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || || || || | |||||||||||| | | || ||
Sbjct 66407190 GCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACC 66407131
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| ||||| || || |||||| | || | | |||| || ||||| || || ||
Sbjct 66407130 CTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAG 66407071
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || || |||||||| |||| |||||
Sbjct 66407070 GGTGATGGTTTTCCCGGTAAGGGTCTTCACAAAGATTTGCAT 66407029
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| ||||| || ||||| || ||||||||||| ||||| | || | || ||
Sbjct 66407013 GAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTC 66406954
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||| || | |||||||||||| | | ||||| ||||| ||
Sbjct 66406953 CTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGAAGGAATTCCCTCCTTGTC 66406894
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || ||| | || | | |||| || || || || || | ||| || ||
Sbjct 66406893 CTGGATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGT 66406834
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| || || | ||||||
Sbjct 66406833 CTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 66406801
>seq1
Length=98543444
Score = 132 bits (146), Expect = 1e-25
Identities = 150/198 (76%), Gaps = 10/198 (5%)
Strand=Plus/Minus
Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAA 151972
|||| || ||||||||||| |||| ||| | |||||||| || ||||| ||||||||
Sbjct 87380390 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTT--CCGGCGAA 87380333
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| | | ||||||||||| | || |||||||| |||||||| || ||||||| |
Sbjct 87380332 GATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATT 87380273
Query 152033 CTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTT 152089
|| | |||| ||| || |||||||| || || || || ||||| ||||| ||
Sbjct 87380272 GTCAATAGTGTC---GCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTT 87380216
Query 152090 CACGAAGACCTGCATTTT 152107
|||||||| |||||||||
Sbjct 87380215 CACGAAGATCTGCATTTT 87380198
Score = 129 bits (142), Expect = 1e-24
Identities = 164/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || ||||| ||||| ||||| || ||||||||||| ||||| | ||| |
Sbjct 57604326 GAGACGGAGCACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACG 57604267
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| |||||||| || | | ||||||||| | | || |||
Sbjct 57604266 ACCATCCTCAAGCTGCTTT--CCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCT 57604209
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || ||| ||| | || | | |||| ||| ||| || || ||
Sbjct 57604208 TCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGG 57604149
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || ||||| || || |||||||||| |||||| ||
Sbjct 57604148 GTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 57604105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153774306430295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |