Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq24612 152 5e-32 >seq24612 Length=73035 Score = 152 bits (168), Expect = 5e-32 Identities = 382/562 (68%), Gaps = 19/562 (3%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 ||||| || || || || | ||||||||||| || | || || || |||||||| Sbjct 59407 CACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTTAAT 59466 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCG--CAGCAAATGACCCCGAAAAGA 16319 || |||||| || || || || ||||| ||||| | ||| || | || ||||||| Sbjct 59467 CCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTT--CCGGAAAAGA 59524 Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTAC 16379 | || || || ||| | |||||||| | || || || ||| | || || || | Sbjct 59525 AAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTTTCAGAGCCAT--C 59582 Query 16380 GAATCCATTTCTGTACCCA-TTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 || |||| | |||| |||| ||| || || | |||| || || || || ||| Sbjct 59583 GA-TCCAACGAAGGGCCCACTTCGCCTTCTT-TTCAACACAAGGGATAGTCTCGATTGCC 59640 Query 16439 TTAAACAATTT-CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 ||||| | ||||||| | | | || | || |||| || | ||| |||||||| Sbjct 59641 CGGAACAACCTACTCTTTT-CGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGTA 59699 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCTCCG 16556 ||| || || || || ||||| ||||| || || ||||||||| ||||| || ||||| | Sbjct 59700 CATCTCGGAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCA-CGCGCCTCAG 59758 Query 16557 CTATTTGTACTTC-CACGTAAAATCGTTCC-GCCAGGTTCTCATTCACGATACCGTCACT 16614 | | ||| || || | | || | |||| || |||||||| ||||| ||||| Sbjct 59759 CAACTTGGACATCTTTCATGAA--CCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGA 59816 Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATG 16674 |||||||||||||| | | || | ||||||| |||| | ||||| || | | Sbjct 59817 GGCAGCAAAAAACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTC 59876 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCACTG 16733 ||||| ||| |||| ||| |||||||||| |||||| |||| | |||| | Sbjct 59877 CCAATGACGAGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGAT-GCCATAG 59935 Query 16734 CCTTTTTATACATTTTCCAAAT 16755 | || || ||||||| |||||| Sbjct 59936 CTTTCTTGTACATTTCCCAAAT 59957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511197860750360