Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq24416 96.9 3e-15 seq24483 84.2 2e-11 seq26232 82.4 7e-11 >seq24416 Length=70076 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | || || ||||| ||||| || |||||| ||| |||| | Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAAAGTTCT 31646 Query 29022 -GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || ||||| || ||| || ||||||||| | || ||| || Sbjct 31647 CGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCA 31706 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||||| | || ||||| || || || |||||||| | ||| |||| |||||||| Sbjct 31707 GCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTACAA 31766 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||||||||||||| || ||||| | ||||| Sbjct 31767 TATTCAGAAGGAATCGACCCTTCATCTTGTGTT 31799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134 ||||||||||||||| || ||||| || || || |||||||| | ||| |||| || Sbjct 35780 AGATCAACAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTGGCTGA 35839 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||||| || ||||||||||| || |||||| |||| Sbjct 35840 TTACAACATCCAGAAGGAATCAACCCTTCACTTGGT 35875 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || ||| || ||||| | |||||||| ||||| || || ||| Sbjct 35304 GATAAGGAAGGCATTCCTCCAGACCAGCAAAGGTTGATCTTTGCCGGCAAGCAGCTTGAA 35363 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 || ||| |||| |||||||| |||||||||||||| ||||||||| |||| Sbjct 35364 GACGGTCGTACTCTGGCTGATTACAACATTCAGAAGGAATCCACTCTTCACTTGGT 35419 >seq24483 Length=75877 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 29050 TTGCC--GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACA 29107 ||||| ||||||||||| | || ||||| || ||||| || ||||| || ||||| Sbjct 24071 TTGCCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATATTTGCTGGGAAACA 24012 Query 29108 ACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 |||||||| |||| |||| |||||||| |||||||| ||||| || |||||| Sbjct 24011 GTTGGAAGATGGTCGAACTTTGGCTGATTACAACATTCAGAAAGAATCAACCCTTCAC 23954 >seq26232 Length=132409 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 107782 TAAACCATGCGGTTCTTTTAGTGGGTTATGGTGTTGAAAACAACATTCCATATTGGACCT 107841 |||||||||| |||||| |||||||| ||||||||||| ||||||| || ||| | Sbjct 128215 TAAACCATGCTGTTCTTGCTGTGGGTTACGGTGTTGAAAATGACATTCCCTACTGGCTCA 128156 Query 107842 TTAAAAACACTTGGGGCACGGATTGGGGAGAGGACGGATTTTTCA 107886 | || ||| | ||||| | |||||||| || | |||| ||||| Sbjct 128155 TAAAGAACTCATGGGGAGCAGATTGGGGTGATCATGGATATTTCA 128111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428159171253815