Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq24416 93.3 3e-14 seq24483 84.2 2e-11 seq26232 82.4 6e-11 >seq24416 Length=70076 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || || ||||| ||||| || |||||| ||| |||| | Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAAAGTTCT 31646 Query 25095 -GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | || | ||| || ||| || ||||||||| | || ||| || Sbjct 31647 CGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCA 31706 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||||| | || ||||| || || || ||||||||| | ||| |||| |||||||| Sbjct 31707 GCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTACAA 31766 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 |||||| |||||||| || ||||| | ||||| Sbjct 31767 TATTCAGAAGGAATCGACCCTTCATCTTGTGTT 31799 Score = 87.8 bits (96), Expect = 1e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 25148 AGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGA 25207 ||||||||||||||| || ||||| || || || ||||||||| | ||| |||| || Sbjct 35780 AGATCAACAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTGGCTGA 35839 Query 25208 TTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||| || || |||||||| || |||||| |||| Sbjct 35840 TTACAACATCCAGAAGGAATCAACCCTTCACTTGGT 35875 >seq24483 Length=75877 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 25123 TTGCC--GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACA 25180 ||||| ||||||||||| | || ||||| || ||||| || ||||| || ||||| Sbjct 24071 TTGCCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATATTTGCTGGGAAACA 24012 Query 25181 ATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238 ||||||||| |||| |||| |||||||| ||||| || ||||| || |||||| Sbjct 24011 GTTGGAAGATGGTCGAACTTTGGCTGATTACAACATTCAGAAAGAATCAACCCTTCAC 23954 >seq26232 Length=132409 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 99555 TAAACCATGCGGTTCTTTTAGTGGGTTATGGTGTTGAAAACAACATTCCGTATTGGACCT 99614 |||||||||| |||||| |||||||| ||||||||||| ||||||| || ||| | Sbjct 128215 TAAACCATGCTGTTCTTGCTGTGGGTTACGGTGTTGAAAATGACATTCCCTACTGGCTCA 128156 Query 99615 TTAAAAACACTTGGGGCACGGATTGGGGAGAGGACGGATTTTTCA 99659 | || ||| | ||||| | |||||||| || | |||| ||||| Sbjct 128155 TAAAGAACTCATGGGGAGCAGATTGGGGTGATCATGGATATTTCA 128111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410627211912422