Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq18302 125 1e-23 seq10662 125 1e-23 seq24549 122 1e-22 seq24483 98.7 1e-15 seq23505 98.7 1e-15 seq22151 95.1 2e-14 seq24416 93.3 6e-14 seq29790 89.7 8e-13 seq26112 89.7 8e-13 >seq18302 Length=24432 Score = 125 bits (138), Expect = 1e-23 Identities = 175/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | |||||| | ||||| || || || ||| | ||| | || || | Sbjct 7165 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTCGAGAGTTCA 7106 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| ||| ||||| || || || ||||| || || ||||| || || || | Sbjct 7105 -GATACTATTGACAATGTTAAAGCA-AAGATCCAAGACAAGGAGGGTATTCCTCCAGACC 7048 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||||| || ||||| ||||| ||| | |||||| | | || | | |||||| | Sbjct 7047 AGCAGAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCCTGGCAGATTACA 6988 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 | ||||| ||||||||||| |||| | ||| | ||| | |||||||||| ||| || Sbjct 6987 ACATTCAGAAAGAATCAACCCTGCACCTTGTTCTTCGTCTTAGAGGTGGTATGCAAATTT 6928 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| |||||| | |||||||| || || || ||||| || | || |||| || | Sbjct 7393 ATGCAGATATTTGTCAAGACACTTACTGGAAAGACTATCACCCTTGAAGTTGAGAGTTCA 7334 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || ||||||||||| || ||||| || || || || Sbjct 7333 -GACACAATTGACAATGTCAAAGCAAAGATTCAAGATAAGGAGGGTATTCCTCCAGACCA 7275 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| || || ||| | |||||| | | || | | || || || Sbjct 7274 GCAGAGGTTGATCTTTGCTGGCAAGCAACTTGAGGATGGAAGGACCCTGGCCGACTACAA 7215 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| ||||| ||||| || ||| | ||| | ||||| | |||||||| Sbjct 7214 TATTCAGAAAGAGTCAACCTTACATCTTGTTCTTCGTTTGAGGGGTGGTAT 7164 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || ||| | ||| | || | Sbjct 7621 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAGACCATCACTCTTGAGGTCGAGAGTTCT 7562 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || |||| | ||| ||||||||||| || ||||| || || ||||| || Sbjct 7561 GACACCATCGATAATGTTAAAGCTAAAATTCAAGACAAGGAAGGCATCCCCCCTGACCAG 7502 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| |||||||| | || ||| | |||||| | | || || || Sbjct 7501 CAGAGGCTGATCTTTGCCGGAAAACAGCTTGAAGATGGCCGAACACTTGCTGACTACAAC 7442 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| | || |||||||| Sbjct 7441 ATCCAAAAGGAGTCCACCCTTCACCTTGTCCTTCGTCTTCGTGGTGGTAT 7392 >seq10662 Length=13073 Score = 125 bits (138), Expect = 1e-23 Identities = 175/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | |||||| | ||||| || || || ||| | ||| | || || | Sbjct 1572 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTCGAGAGTTCA 1513 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| ||| ||||| || || || ||||| || || ||||| || || || | Sbjct 1512 -GATACTATTGACAATGTTAAAGCA-AAGATCCAAGACAAGGAGGGTATTCCTCCAGACC 1455 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||||| || ||||| ||||| ||| | |||||| | | || | | |||||| | Sbjct 1454 AGCAGAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCCTGGCAGATTACA 1395 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 | ||||| ||||||||||| |||| | ||| | ||| | |||||||||| ||| || Sbjct 1394 ACATTCAGAAAGAATCAACCCTGCACCTTGTTCTTCGTCTTAGAGGTGGTATGCAAATTT 1335 >seq24549 Length=72154 Score = 122 bits (134), Expect = 1e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | ||||| || || ||||| || || ||| | ||| |||| ||| Sbjct 57596 ATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTTGAGAGCTCC 57655 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || || |||||||| || ||||| || || |||||||| Sbjct 57656 -GACACAATTGACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGAATTCCCCCTGATCA 57714 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| ||||| |||||||||||| || |||| | | ||| ||||| Sbjct 57715 GCAAAGGTTGATCTTTGCTGGAAAGCAATTAGAGGATGGTAGAACTCTTGCAGACTATAA 57774 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| | || ||||| || Sbjct 57775 CATCCAAAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTGCGTGGTGGCAT 57825 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| || ||| | |||||| | || || || ||||| || | ||| | || ||| Sbjct 58507 AATGCAGATCTTTGTGAAGACATTGACTGGGAAGACTATTACCTTGGAGGTGGAGAGCTC 58566 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| |||| | || || ||||| ||||| || ||||| ||||| || | Sbjct 58567 G-GATACCATTGATAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCACCAGACC 58625 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||||| |||||||| || || || | |||||| |||| || | | || |||| Sbjct 58626 AGCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTTGCTGACTATA 58685 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 | ||||| ||||||||||| | || | ||| | ||| | || ||||| Sbjct 58686 ACATTCAGAAAGAATCAACACTTCACCTTGTTCTTCGTCTCCGTGGTGG 58734 >seq24483 Length=75877 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || ||||||||||| ||||| |||||||| || || || || ||||| || ||||| || Sbjct 24067 CAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATATTTGCTGGGAAACAGTTG 24008 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAAC 124735 || ||| ||||||| || | ||||| || ||||| ||||||||||| Sbjct 24007 GAAGATGGTCGAACTTTGGCTGATTACAACATTCAGAAAGAATCAAC 23961 >seq23505 Length=59109 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || |||| ||||| || || || || || || ||||| | || ||| Sbjct 3352 ATGCAGATCTTCGTAAAAACACTCACCGGAAAGACCATCACCCTAGAGGTGGAGAGCTCC 3293 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| || | || || || || ||||| ||||| || || || ||||| Sbjct 3292 -GATACAATTGACAACGTTAAGGCTAAGATCCAGGATAAGGAAGGGATTCCCCCGGATCA 3234 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||||||||| || ||||| || | ||||| | || || ||| ||||| || Sbjct 3233 GCAAAGGCTTATTTTCGCCGGAAAGCAGCTTGAGGACGGACGTACTCTAGCTGATTACAA 3174 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || | |||||||| | ||| | || |||||||| Sbjct 3173 CATCCAGAAGGAGTCTACCCTCCATTTGGTGCTTCGTCTCCGTGGTGGTAT 3123 >seq22151 Length=46047 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || || |||||||| ||||| ||||| || || || || |||||||| |||||||| || Sbjct 13856 CAGGACAAAGAAGGGATACCTCCTGACCAGCAGAGACTAATTTTTGCTGGAAAACAGTTG 13915 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| ||||||| | | ||||| || || || ||||||||||| | || ||||| Sbjct 13916 GAAGATGGTCGAACTCTGGCTGATTACAACATCCAGAAAGAATCAACACTTCACCTGGTT 13975 Query 124749 TT 124750 || Sbjct 13976 TT 13977 >seq24416 Length=70076 Score = 93.3 bits (102), Expect = 6e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || ||||| ||||| || | || | ||| | Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAAAGTTCT 31646 Query 124599 -GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || || ||||| || ||||||||||| ||||| || || Sbjct 31647 CGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCA 31706 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| || || || || || ||| | ||||| | | ||||| || Sbjct 31707 GCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTACAA 31766 Query 124718 TATTCAAAAAGAATCAAC 124735 |||||| || ||||| || Sbjct 31767 TATTCAGAAGGAATCGAC 31784 >seq29790 Length=1029 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 || ||||||| ||| || || ||||| | || ||||| | || ||||| || ||| Sbjct 757 AAAACACTAAGAGGGAAGACCATAACCCTTGAAGTTGAATCCAACGATACCATCAACAAT 698 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | || |||||||| || || |||||||| |||| || || | || || ||| Sbjct 697 GTCAAGGCTAAAATTCAGGACAAGGAAGGTATTCCACTGGACCAGCCGCAACTGATCTTT 638 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || || ||| | | || ||| | || ||||| ||||||||||| |||||||||| Sbjct 637 GCTGGTAAAAAGCTTGAAGATGGGCGTACATTGCCGGATTATAATATCCAAAAAGAATTG 578 Query 124734 ACTTTGCATTTGGTTTT 124750 ||||||||| | || || Sbjct 577 ACTTTGCATCTTGTCTT 561 >seq26112 Length=112099 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 || ||||||| ||| || || ||||| | || ||||| | || ||||| || ||| Sbjct 86818 AAAACACTAAGAGGGAAGACCATAACCCTTGAAGTTGAATCCAACGATACCATCAACAAT 86759 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | || |||||||| || || |||||||| |||| || || | || || ||| Sbjct 86758 GTCAAGGCTAAAATTCAGGACAAGGAAGGTATTCCACTGGACCAGCCGCAACTGATCTTT 86699 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || || ||| | | || ||| | || ||||| ||||||||||| |||||||||| Sbjct 86698 GCTGGTAAAAAGCTTGAAGATGGGCGTACATTGCCGGATTATAATATCCAAAAAGAATTG 86639 Query 124734 ACTTTGCATTTGGTTTT 124750 ||||||||| | || || Sbjct 86638 ACTTTGCATCTTGTCTT 86622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755136130486400