Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq24416 105 4e-18 seq28317 96.9 2e-15 seq23505 95.1 8e-15 seq18302 95.1 8e-15 seq12531 95.1 8e-15 seq26916 89.7 3e-13 seq26813 87.8 1e-12 seq23168 86.0 4e-12 >seq24416 Length=70076 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||||| ||| || || | ||| ||||||||| || |||||||| | || | Sbjct 35656 AGCCTCAACACAAGATGAAGAGTCGATTCTTTCTGAATATTGTAGTCAGCGAGAGTCCTT 35597 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || ||||||||||| || || ||||| || | |||||||| ||| | || |||| Sbjct 35596 CCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGGATGCCCTCC 35537 Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 ||||| ||||| ||||| | | | | || | || | ||| || || | || Sbjct 35536 TTGTCCTGAATCTTG-GCTTTCACGTTGTCAATGGTGTCAGAGCTTTCCACCTCAAGAGT 35478 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||||||| || ||||| ||||||||||||||||||||| Sbjct 35477 GATGGTTTTTCCTGTGAGGGTTTTCACAAAGATCTGCATC 35438 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| || ||||| |||||||| || | || |||| |||| Sbjct 31261 AGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGGCCGTCT 31202 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||| || || ||||| |||| ||||||||| ||| | || |||||||| Sbjct 31201 TCAAGTTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 31142 Query 34298 GCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| |||||| || | | || | |||| ||| || || | |||||||| Sbjct 31141 TGGATCTTG-GCTTTAACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGT 31083 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || ||||| ||||| ||||||||||||||| Sbjct 31082 CTTTCCAGTGAGGGTTTTAACAAAGATCTGCATC 31049 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || || ||||| ||||| || || || ||||||||||| Sbjct 36125 GAAACCACCACGGAGACGGAGGACAAGGTGCAAAGTTGACTCCTTTTGGATGTTGTAGTC 36066 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278 | ||| | | || |||| |||||| |||||||| || || | ||||||||| Sbjct 36065 TGCCAGAGTCCTTCCATCTTCCAGCTGCTTCCCTGCGAAGATCAGTCTCTGCTGGTCTGG 36006 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338 ||| | || |||||||| ||||| ||| | || | | || | ||| | ||| Sbjct 36005 GGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTCACATTGTCAATAGTATCAGAACTTTC 35946 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || |||| || | |||||| || || | || || ||||| ||||||||| Sbjct 35945 CACCTCCAGAGTAACGGTTTTCCCAGTCAACGTCTTGACAAAAATCTGCATC 35894 >seq28317 Length=665 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || ||||| || || || || | |||| |||||||| || |||||||| | Sbjct 350 TCCACCACGGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGC 409 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || || | |||||| || ||||| ||||||| ||| || || || Sbjct 410 AAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGG 469 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | ||||| || ||| ||||||||| | || | | || | ||| | || | Sbjct 470 AATCCCTTCCTTATCTTGTAT-TTTTGCTTTCACATTGTCAATAGTATCTGAGCTCTCCA 528 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| ||||| ||||| ||||| ||||| ||||||||||| Sbjct 529 CCTCCAATGTGATNGTTTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 577 >seq23505 Length=59109 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | |||||||||||||| ||| | || || || || |||||||| || | Sbjct 2441 TCCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGC 2500 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 ||| ||| | || || | |||||| || || || || | || ||||||||| | ||| Sbjct 2501 CAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGG 2560 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | | ||||||||| ||||| ||| | || | | || | |||| || | Sbjct 2561 G-ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAA 2619 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| || |||||||| || || ||||| |||||||| Sbjct 2620 CCTCCAAGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAAATCTGCAT 2668 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | |||||||||||||| ||| | || || || || |||||||| || | Sbjct 2669 TCCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGC 2728 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| ||| | || || | |||||| || || || || | || ||||||||| || Sbjct 2729 CAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGG 2788 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | | || | |||| || || Sbjct 2789 GATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAAC 2848 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| || ||||| || ||||||| || ||||||||||| |||||| Sbjct 2849 CTCCAGGGTAATGGTCTTCCCGGTGAAGGTCTTCACAAAGATTTGCATC 2897 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || | || ||| | || || |||||||| || || || Sbjct 2934 TCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCATCCTCAAACTGCTTACCAGCAAAG 2993 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || ||||||||| ||| | | ||||||||| ||||| ||| | || | Sbjct 2994 ATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTAACATTG 3053 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| ||| || || | |||||||| ||||||||||| || || || Sbjct 3054 TCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTGACG 3113 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 3114 AAGATCTGCAT 3124 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| || ||||| |||||||| || | || ||| |||| Sbjct 3141 AGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCC 3200 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| |||| ||||| || ||| | | ||||| || Sbjct 3201 TCAAGCTGCTTTCCGGCGAAAATAAGCCTTTGCTGATCCGGGGGAATCCCTTCCTTATCC 3260 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||||| || || || | |||||||| Sbjct 3261 TGGATCTTAGCCTTAACGTTGTCAATTGTATCGGAGCTCTCCACCTCTAGGGTGATGGTC 3320 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || |||||||| ||||| || |||||||||||| Sbjct 3321 TTTCCGGTGAGTGTTTTTACGAAGATCTGCATC 3353 >seq18302 Length=24432 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || ||||| || || || || | |||| |||||||| || |||||||| | Sbjct 6254 TCCACCACGGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGC 6313 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || || | |||||| || ||||| ||||||| ||| || || || Sbjct 6314 AAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCGAATATGAGCCTCTGTTGATCTGGTGG 6373 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | ||||| || ||||||| ||||| | || | | || | ||| | || | Sbjct 6374 AATCCCTTCCTTATCTTGTATCTTT-GCTTTCACATTGTCAATAGTATCTGAGCTCTCCA 6432 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| ||||| ||||| ||||| ||||| ||||||||||| Sbjct 6433 CCTCCAATGTGATCGTTTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 6481 >seq12531 Length=12345 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || ||||| || || || || | |||| |||||||| || |||||||| | Sbjct 11915 TCCACCACGGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGC 11974 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || || | |||||| || ||||| ||||||| ||| || || || Sbjct 11975 AAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGG 12034 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | ||||| || ||| ||||||||| | || | | || | ||| | || | Sbjct 12035 AATCCCTTCCTTATCTTGTAT-TTTTGCTTTCACATTGTCAATAGTATCTGAGCTCTCCA 12093 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| ||||| ||||| ||||| ||||| ||||||||||| Sbjct 12094 CCTCCAATGTGATAGTTTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 12142 >seq26916 Length=217370 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/229 (70%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||| || |||| ||| || |||||| ||||||||||| | Sbjct 172024 CCACCACGAAGCCTTAGCACTAGATGTAGAGTTGATT-TTTCTGGATGTTGTAGTCCACC 171966 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || | | || || | |||||| || || ||||| |||| |||||||| | || Sbjct 171965 AAGATG-CAGCAATCCTCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCAAGAGG 171907 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGA 34340 | | || ||||| |||||| || |||| || | | || ||| | |||| || Sbjct 171906 GATTCCTTCTTTGTCTTGTATCTTG-GCCTTAGCATTGTCGATACTATCACTGGATTTGA 171848 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| | |||||||| | ||| ||||||||||| | |||||||| Sbjct 171847 CTTCCAGAATAATGGTTTTACTGGTCAGAGTTTTCACGAGTATCTGCAT 171799 >seq26813 Length=197329 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || || | || || | |||||| ||||||||| Sbjct 149189 TCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCAAGCTGCTTACCTGCGAAA 149130 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | |||||||||||| || | || |||||||| ||||| ||| | || | Sbjct 149129 ATCAACCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTG 149070 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || |||| || || || || || || || || |||||| Sbjct 149069 TCGATGGTGTCTGATGACTCTACCTCCAAGGTAATAGTCTTACCCGTCAGGGTCTTCACA 149010 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 149009 AAGATCTGCAT 148999 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || || | || || | |||||| ||||||||| Sbjct 97342 TCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGCTTACCTGCGAAA 97401 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || ||||||||| || | || |||||||| ||||| ||| | || | Sbjct 97402 ATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTG 97461 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || || | || || || ||||| || || || |||||| Sbjct 97462 TCAATGGTGTCAGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCACA 97521 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 97522 AAGATCTGCAT 97532 >seq23168 Length=55519 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| || || | ||| || ||||| ||||||||||||| || || | || Sbjct 53732 AGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCC 53791 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| | ||||||||||| ||| | | |||||||| Sbjct 53792 TCAAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCT 53851 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| || ||||| | || | | || | || | || || || || | ||||| || Sbjct 53852 TGGATC-TTGGCTTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCTAGGGTGATCGT 53910 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || |||||||| |||||||||||| Sbjct 53911 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 53944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322938627094880