Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq24483 105 5e-18 seq22151 93.3 3e-14 seq24416 89.7 4e-13 seq24549 86.0 5e-12 >seq24483 Length=75877 Score = 105 bits (116), Expect = 5e-18 Identities = 109/142 (77%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || || || | |||||| ||||||||||| ||||||||||| || || Sbjct 23930 TCCTCCCCTGAGCCTCAGAACAAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGC 23989 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| || ||||||||| ||||| || ||| | || ||||| || ||||| || Sbjct 23990 CAAAGTTCGACCATCTTCCAACTGTTTCCCAGCAAATATCAGTCTCTGCTGATCAGGAGG 24049 Query 18218 CACGCCTTCCTTATC--GGCAA 18237 | |||||| ||||| ||||| Sbjct 24050 TATGCCTTCTTTATCCTGGCAA 24071 >seq22151 Length=46047 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || | |||| |||||||||||||||||| || |||||||| || || Sbjct 13993 TCCTCCCCTCAGCCTCAAAACCAGGTGAAGTGTTGATTCTTTCTGGATGTTGTAATCAGC 13934 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 || ||| || ||||||||| ||||| || ||| | || ||||| || || || Sbjct 13933 CAGAGTTCGACCATCTTCCAACTGTTTTCCAGCAAAAATTAGTCTCTGCTGGTC 13880 >seq24416 Length=70076 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| |||||||| || || |||||||| || |||| || | | |||| Sbjct 35878 AGGACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAGAGTCCTTCCATCT 35819 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || || || ||| | || |||||||||||||| ||| | ||| ||||| || Sbjct 35818 TCCAACTGCTTACCAGCAAAAATCAGTCTTTGTTGATCTGGGGGAATGCCCTCCTTGTC 35760 >seq24549 Length=72154 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | ||| || || || || ||||| ||||| ||||| || Sbjct 58050 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCA 57991 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||| ||||| ||||| || || |||| | ||| || ||||| || Sbjct 57990 AGAGTTCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGA 57931 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| |||| | |||||| | ||| |||||| | ||| Sbjct 57930 ATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACC 57871 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || | || || ||||| ||||| ||||| || ||||| Sbjct 57870 TCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCAT 57824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379187396483385