Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq24416 104 2e-17 seq22151 100 3e-16 seq24549 98.7 9e-16 seq24483 95.1 1e-14 seq23168 86.0 6e-12 >seq24416 Length=70076 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || || || ||||| ||||| ||||| | || || ||| || Sbjct 35439 ATGCAGATCTTTGTGAAAACCCTCACAGGAAAAACCATCACTCTTGAGGTGGAAAGCTCT 35498 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||||||| ||| | || || |||||| Sbjct 35499 GACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 35558 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||| || ||||||||||| | |||| | || || || Sbjct 35559 CAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTCGCTGACTACAAT 35618 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| |||||||||||||||||||| || | || || ||||| || Sbjct 35619 ATTCAGAAAGAATCGACTCTTCATCTTGTGTTGAGGCTCAGGGGAGG 35665 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || ||||| || ||||| | || || ||| || Sbjct 35667 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAGGTGGAAAGCTCT 35726 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || || || Sbjct 35727 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAA 35786 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||| || ||||||||||| | |||| || ||||| ||| Sbjct 35787 CAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTGGCTGATTACAAC 35846 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || ||||| |||| || Sbjct 35847 ATCCAGAAGGAATCAACCCTTCACTTGGTCCT 35878 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC- 31251 |||||||| || || ||||| |||| ||||| || || ||| | || || ||| || Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAAAGTTCT 31646 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || | || |||||| ||||| | || || ||||| Sbjct 31647 CGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCA 31706 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | | || || ||||| || ||||||||||| | || || ||||| || Sbjct 31707 GCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTACAA 31766 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || |||||||| |||||||| || | || || ||||| |||| Sbjct 31767 TATTCAGAAGGAATCGACCCTTCATCTTGTGTTGAGGCTCAGGGGGGGTA 31816 >seq22151 Length=46047 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||| ||||| | || || ||||||||| | ||||| || ||||| ||||||||||| Sbjct 13858 GGACAAAGAAGGGATACCTCCTGACCAGCAGAGACTAATTTTTGCTGGAAAACAGTTGGA 13917 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | ||| || ||||| ||||| || |||||||| || ||||| ||||| | Sbjct 13918 AGATGGTCGAACTCTGGCTGATTACAACATCCAGAAAGAATCAACACTTCACCTGGTTTT 13977 Query 31405 TAGACTGAGGGGCGG 31419 || |||||||| || Sbjct 13978 GAGGCTGAGGGGAGG 13992 >seq24549 Length=72154 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| || || || |||||| | || || ||| || Sbjct 58280 ATGCAGATCTTTGTTAAGACACTGACTGGAAAGACTATCACCCTGGAGGTAGAAAGTTCA 58339 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || ||| || ||| | ||||| ||||| | || || ||||| Sbjct 58340 GACACCATTGATAATGTGAAAGCAAAGA-TCCAAGACAAAGAAGGGATTCCACCAGACCA 58398 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| |||| || |||||||| ||| | || || | |||| | ||||| || Sbjct 58399 GCAGCGTTTAATTTTTGCTGGCAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTACAA 58458 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || ||| |||| || ||||||| || || Sbjct 58459 CATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGACTGAGAGGAGG 58506 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || ||| |||| || || || || ||| | || |||||| || Sbjct 58051 CATGCAGATCTTTGTGAAAACTTTGACTGGAAAGACTATTACCCTTGAGGTTGAAAGCTC 58110 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| | ||| ||||||||||||| | || || || || Sbjct 58111 TGACACTATTGACAATGTCAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGATCA 58170 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || ||||| || || | || || | || | || || || Sbjct 58171 GCAGAGGTTGATTTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTTGCTGACTACAA 58230 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| |||||||||||||| || | || ||||| |||| Sbjct 58231 TATTCAGAAAGAATCCACTCTTCATCTGGTGCTGCGCCTAAGGGGTGGTA 58280 >seq24483 Length=75877 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||| || |||||| | || || || |||||| | || ||||| ||||| ||||||||||| Sbjct 24065 GGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATATTTGCTGGGAAACAGTTGGA 24006 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | ||| || ||||| |||||||| |||||||| || ||||| || || || Sbjct 24005 AGATGGTCGAACTTTGGCTGATTACAACATTCAGAAAGAATCAACCCTTCACCTTGTTCT 23946 Query 31405 TAGACTGAGGGGCGG 31419 || || ||||| || Sbjct 23945 GAGGCTCAGGGGAGG 23931 >seq23168 Length=55519 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || || ||||||||| | || ||||| | Sbjct 53946 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCT 53887 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | |||||| | || ||||||||||| | || || ||| Sbjct 53886 TCTGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGAC 53827 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| | || ||||| || || ||| | || || | ||| | ||| || Sbjct 53826 CAGCAGCGATTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTTGCCGACTAC 53767 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| ||||| || || Sbjct 53766 AACATCCAGAAGGAGTCAACTCTCCATCTCGTGCT 53732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445577656934160