Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq24612 188 9e-43 seq22878 89.7 7e-13 >seq24612 Length=73035 Score = 188 bits (208), Expect = 9e-43 Identities = 578/892 (65%), Gaps = 4/892 (0%) Strand=Plus/Plus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||||||||| ||| || || || || || | || || || |||||||| || ||| Sbjct 59101 GACATAACTGAAGCTTTCTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCT 59160 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 | ||| || ||||| |||| |||||||| | |||| || || || | | | Sbjct 59161 TGTAAGCTAATCAGCTCCATCCAATCAAATGGATTCTGAGCATTGTACATCTTGTCATAA 59220 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 ||||| || | |||||| || || ||||||||||| ||||| |||||| || | | Sbjct 59221 CCCAAAGCATCCAACAATCTGTCAGCCACAAATTCTATGTATGTACTCATCAAATCTCCA 59280 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 ||||| || | || | || ||||| || | ||| || ||| || || Sbjct 59281 TTCATACCCACCAGCGCACAGGGCAGAGCATCACACACAAACTCCCTTTCTATCTCCACA 59340 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAA 36149 || |||| | || | ||| ||| || || | | | | || | ||| Sbjct 59341 GCCTCTGCAACGATTCCCCTGACTCGTTCCCCAGTCAGCTTCGTCCTCAGCAAACTGTAA 59400 Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 | ||| || || ||||| ||||| | ||| |||||||| ||| || || || || | Sbjct 59401 AG--CAAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGA 59458 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269 | || | ||||||||||| || |||||||| | ||||||||| || || ||| | Sbjct 59459 AAGTTAATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGG 59518 Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGT 36329 |||||||||| |||||||| ||||| || | | | |||| | | || | Sbjct 59519 AAAAGAAAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTTTCAGAGC 59578 Query 36330 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 ||| ||||| | ||||| | |||||||||| |||||||| || ||||| || | Sbjct 59579 CATCGATCCAACGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTG 59638 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 | || | | ||||| | | || || | || | || | || | ||| | Sbjct 59639 CCCGGAACAACCTACTCTTTTCGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGT 59698 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 |||| || ||||| || || |||||||| ||||| ||||| |||||| | ||||| | Sbjct 59699 ACATCTCGGAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCACGCGCCTCAG 59758 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569 || || || ||| | || | | | || | || || || || ||||| || Sbjct 59759 CAACTTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAGG 59818 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCC 36629 | ||||||||||| | ||||| | || |||| |||| | |||||| || | || Sbjct 59819 CAGCAAAAAACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCC 59878 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 ||| | |||| ||||| ||| |||||||| | ||||| || |||||| || | Sbjct 59879 AATGACGAGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCATAGCTT 59938 Query 36690 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741 | || ||||| | ||| || | | || |||||||| || ||| ||||| Sbjct 59939 TCTTGTACATTTCCCAAATTTGTGGGTACTGAATTGGGAACATACAGAATCT 59990 >seq22878 Length=52695 Score = 89.7 bits (98), Expect = 7e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 ||||| || || | |||| ||| |||| |||| | || | | ||| |||||||| ||| Sbjct 22386 CCTCCTTGGTCAACATATCGAGCAGTGTCATTAAACACACGTAGCATCGGAATAATTCCA 22327 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 || ||||| ||||| || || ||||| || ||| | |||||||||| | || Sbjct 22326 TTTGATGTCCCATTTGTTCCACGAATATAACTCCCAGTACCACGAATATTGTGCACCGAA 22267 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | || ||||| || || |||| || | || || || | |||||||| ||| Sbjct 22266 ACTCCAATTCCTCCAGCAGATTTACTAATAACAGCACACTCCTTAAGAGTATCATATATG 22207 Query 66396 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 ||||| ||||||||||| ||||| | || || |||||| Sbjct 22206 CCCTCAATACTATCATCTTTCATGCATATCAGGAAGCAGCTA 22165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657894121409320