Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq18302 96.9 3e-15 seq24416 95.1 1e-14 seq24483 84.2 2e-11 seq24549 82.4 8e-11 seq10662 82.4 8e-11 >seq18302 Length=24432 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 |||||| || || || | || ||||| || || |||||||| || | ||| || Sbjct 6494 ACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCAAGTGTCCTGCC 6553 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 || || || |||||||||||| |||||| ||| ||||| || || || || || || || Sbjct 6554 ATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTT 6613 Query 139669 GTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727 ||| ||| | |||| |||| | | || | || || | || ||||||||| | || | Sbjct 6614 GTC-TTGAATCTTTGCTTTAACATTGTCAATGGTATCTGAGGACTCCACCTCCAATGTGA 6672 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || |||| || || ||||| || ||||| Sbjct 6673 TAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | ||| | ||| | || || ||||| |||||||| ||||| | Sbjct 6939 CCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 6998 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || || || || |||||| ||||||| | ||||| || ||||| Sbjct 6999 AGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 7058 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| ||| ||| | | || | || || | ||| ||| Sbjct 7059 ATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATAGTATCTGAACTCTCGACC 7118 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || || |||||||||||| Sbjct 7119 TCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCATA 7166 >seq24416 Length=70076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| |||||||| || || ||||| ||||| Sbjct 35209 CCACCACGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCA 35150 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||||||||| || |||||| ||||||| | ||||| || ||||| Sbjct 35149 AGGGTCCGACCATCTTCGAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 35090 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | ||||| | | |||||| Sbjct 35089 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCCACC 35030 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||| ||||| | ||||| ||||| || ||||| Sbjct 35029 TCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACGAAAATCTGCAT 34983 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/205 (70%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || || || || ||||| || ||||| || ||| || ||||| | ||| Sbjct 31790 TGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCCAGTGTTCTTCCATCTTCCAACTGC 31731 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 ||||||||| | |||| | |||||| || || || || ||||||||||| ||| | || Sbjct 31730 TTACCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTGTC-CTGAATCTT 31672 Query 139682 TGTTTTAGC-TGTTCCACTGTGTCG-GTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 | ||| | | || | |||||| | ||||| |||| ||| | |||||||| | Sbjct 31671 GGCCTTAACATTGTCAATGGTGTCGAGAACTTTCCACTTCAAGGGTAATAGTCTTGCCAG 31612 Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764 |||| || || || || |||||||| Sbjct 31611 TCAAGGTCTTCACAAAGATTTGCAT 31587 >seq24483 Length=75877 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/122 (76%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG-- 139609 || ||| | ||||| || || ||||| |||||||| ||||| || || |||| Sbjct 23945 CAGAACAAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGCCAAAGT--TCGACCA 24002 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| | |||||| |||||| | ||||| | |||||||| ||||||||||||||||| Sbjct 24003 TCTTCCAACTGTTTCCCAGCAAATATCAGTCTCTGCTGATCAGGAGGTATGCCTTCTTTA 24062 Query 139670 TC 139671 || Sbjct 24063 TC 24064 >seq24549 Length=72154 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||| | || ||||| ||||| |||||||| || Sbjct 57823 GCCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCTGC 57764 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || || || | || || |||||| |||||| | ||||||||| || || Sbjct 57763 AAGAGTTCTACCATCCTCTAATTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGGGG 57704 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | |||| || | | || | |||||||| | ||| | Sbjct 57703 AATTCCTTCCTTGTCT-TGAATCTTTGCCTTGACATTGTCAATTGTGTCGGAGCTCTCAA 57645 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | || | ||||||||||| | || || || || |||||||| Sbjct 57644 CCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 57596 >seq10662 Length=13073 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | ||| | ||| | || || ||||| |||||||| ||||| | Sbjct 1346 CCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 1405 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || || || || |||||| ||||||| | ||||| || ||||| Sbjct 1406 AGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 1465 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| ||| ||| | | || | || || | ||| ||| Sbjct 1466 ATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATAGTATCTGAACTCTCGACC 1525 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || || |||||||||||| Sbjct 1526 TCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCATA 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495853960301600