Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq24612 96.9 3e-15 >seq24612 Length=73035 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 || |||||||||||||| || | || || ||||| ||| | || || || || ||| Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 ||||| ||||| || || || ||||| ||||||||||||| | ||| |||||||||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAG 59523 Query 13777 AATATTCCCTCAACTGCAGCAAACGC 13802 || || || || || |||||| || Sbjct 59524 AAAATCCCTTCTACACAAGCAAAAGC 59549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478386159519720