Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq23168 87.8 1e-12 >seq23168 Length=55519 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | ||| | ||||| ||| |||||| || | ||||| |||| Sbjct 53717 CCACCACGGAGACGGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCA 53776 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || || | || || ||||| |||||||||||||| || || | || Sbjct 53777 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 53836 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| ||||||| || | | ||||| || ||| || Sbjct 53837 ATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAAGACTCAACC 53896 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTC 43113 |||| || || || || || ||||| |||||||| || || ||||| ||| Sbjct 53897 TCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTC 53947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381212160260634