Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq25469 152 8e-33 seq21451 147 3e-31 seq26854 114 2e-21 seq26939 98.7 2e-16 seq25265 89.7 8e-14 seq26278 80.6 4e-11 >seq25469 Length=92852 Score = 152 bits (168), Expect = 8e-33 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||||||||| || | ||| || |||||||| ||||| ||||| ||||||||||| Sbjct 62076 GCTAAGCGTCACCGTAAGGTTCTCCGTGATAACATTCAAGGTATCACTAAGCCAGCTATT 62135 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| |||||||| | || ||||| |||||| || ||| | |||| || |||| | Sbjct 62136 AGGCGTTTGGCTCGTAGAGGAGGAGTGAAGCGTATCAGTGGTCTTATCTACGAGGAGACT 62195 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||||||||| | ||| || || | ||||||| | || || ||| Sbjct 62196 CGTGGGGTTCTGAAGATCTTCTTGGAGAATGTGATTCGTGATGCTGTTACTTACACTGAG 62255 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||| | |||||||| || | |||||| | ||||||||| | || | ||||| Sbjct 62256 CATGCTAGGAGGAAGACTGTGACTGCTATGGATGTTGTCTATGCACTCAAGAGACAAGGA 62315 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| |||||| | ||| Sbjct 62316 AGGACTTTGTATGGATTTGGAGGCTAA 62342 Score = 145 bits (160), Expect = 1e-30 Identities = 179/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||| ||||| ||||| || || ||||| || ||| |||||||| | || Sbjct 25029 CTCCGTGATAACATTCAAGGTATCACAAAACCTGCTATTCGGCGTTTGGCTCGTAGAGGA 24970 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||| |||||| || ||| ||| | ||||| |||| ||||| ||| | ||||||||| Sbjct 24969 GGAGTGAAGCGTATCAGTGGTTTGATTTATGAGGAGACTCGTGGGGTTCTTAAGATCTTC 24910 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| || || | ||||||| | ||||||||||| |||| | |||||||| Sbjct 24909 TTGGAGAATGTGATTCGTGATGCTGTTACTTATACCGAGCATGCTAGGAGGAAGACTGTT 24850 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || |||||||| | || ||||| | || | ||||| | | | ||||| ||||| Sbjct 24849 ACTGCCATGGATGTTGTTTATGCGCTTAAGAGGCAAGGAAGGACCCTATATGGATTTGGG 24790 Query 16694 AGTTA 16698 |||| Sbjct 24789 GGTTA 24785 >seq21451 Length=40624 Score = 147 bits (162), Expect = 3e-31 Identities = 178/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||| ||||| || ||||||||||| ||| | || |||||| | ||||| || Sbjct 15713 GATAACATCCAGGGAATTACTAAGCCAGCTATTCGTAGACTCGCTCGTAGAGGTGGTGTG 15654 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| | ||||||||| | || || |||| ||||| ||| | ||||||||| | || Sbjct 15653 AAGCGTATTTCTGGATTGATTTACGAGGAGACTCGTGGGGTTCTCAAGATCTTCTTGGAG 15594 Query 16580 ACCGTTATCCATGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTC 16638 | || || | ||||||| || || || || ||||| |||| | |||||||| || | Sbjct 15593 AATGTGATTCGTGATGCTGTTACA-TACACTGAGCATGCTAGGAGAAAGACTGTTACTGC 15535 Query 16639 CATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| |||| | || || | | |||| || |||||| |||| Sbjct 15534 TATGGATGTTGTTTATGCCCTGAAGAGACAGGGAAGGACCCTTTACGGATTTGGAGGTTA 15475 >seq26854 Length=226277 Score = 114 bits (126), Expect = 2e-21 Identities = 188/271 (69%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || ||||| || | | ||| || || ||||| || |||||||||||||| || || Sbjct 102611 GCAAAACGTCACCGGAAAGTTCTCCGTGACAACATTCAGGGAATCACCAAGCCGGCGATA 102552 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | | || || | | |||||||| ||| | || || ||| |||||||||||| Sbjct 102551 AGGAGGCTTGCGAGAAGAGGTGGAGTGAAGAGAATCAGCGGGTTGATCTATGAAGAGACA 102492 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | ||||||||||||||| | ||| || || | ||||||| | || || ||| Sbjct 102491 AGAGGTGTTTTGAAGATCTTTTTGGAGAATGTGATTCGTGATGCTGTGACTTACACTGAG 102432 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||| | |||||||| || | |||||| | || ||||| ||||| | ||||| Sbjct 102431 CATGCTAGGAGAAAGACTGTTACTGCTATGGATGTTGTTTATGCTTTGAAGAGACAAGGA 102372 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | | |||| || ||||| ||| || || Sbjct 102371 AGGACTCTTTACGGGTTTGGTGGTTGATTTT 102341 Score = 113 bits (124), Expect = 7e-21 Identities = 185/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||||| | | || || || ||||| || |||||||| |||||||| || Sbjct 100046 GCGAAACGTCATCGGAAAGTCCTCCGTGACAACATTCAGGGAATCACTAAGCCAGCAATT 99987 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || | | || | | |||||||| ||| | || ||| ||| |||| ||||| | Sbjct 99986 CGGAGATTAGCGAGAAGAGGTGGAGTGAAGAGAATCAGTGGGTTGATCTACGAAGAAACA 99927 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | |||||||||||||| | ||| || || | ||||||| | ||| || ||| Sbjct 99926 AGAGGGGTTTTGAAGATCTTTTTGGAGAATGTGATTCGTGATGCTGTGACCTACACTGAG 99867 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || | | |||||||| || | |||||| | || ||||| ||||| | ||||| Sbjct 99866 CATGCGAGGAGGAAGACTGTTACTGCTATGGATGTTGTTTATGCTTTGAAGAGACAAGGA 99807 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | ||||||| ||||| ||||| Sbjct 99806 AGGACTCTTTATGGGTTTGGTGGTTAA 99780 >seq26939 Length=281868 Score = 98.7 bits (108), Expect = 2e-16 Identities = 170/247 (69%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || |||||||| ||||| | ||| |||||||| || | ||| |||||||| | || Sbjct 103008 TCTCCGTGATAACATTCAAGGTAACACAAAGCCAGCCATTAGGCGTTTGGCTCGTAGAGG 102949 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||||| |||| | || ||| | | |||| |||| | ||| ||| |||||||||| Sbjct 102948 AGGAGTGAAGCATATCAGTGGGCTTATGCATGAGGAGACTTGTGGGGTTCTGAAGATCTT 102889 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | ||| || || ||||||| | || |||||||| ||| | || || || Sbjct 102888 CTTTGAGAATGTGATTTGTGATGCTGTTACTTACACCGAGCATTCTAGGAGGAATACGGT 102829 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | |||| | | ||||||||| | || ||||| | | || |||||||| Sbjct 102828 GACTGCTATGGGTGTTGTCTATGCACTCAAGAAACAAGGAAGGACTTCGTAGGGTTTTGG 102769 Query 16693 AAGTTAA 16699 | ||||| Sbjct 102768 AGGTTAA 102762 >seq25265 Length=102700 Score = 89.7 bits (98), Expect = 8e-14 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| || ||||| ||||||||||| | | || |||| | | ||||| | Sbjct 91789 GAGACAACATCCAGGGCATCACTAAGCCAGCTATTCACAGGCTTGCTCATAGGGGTGGTG 91848 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || || |||| || | | ||||| |||| | || || |||||||||| | Sbjct 91849 TGAAAAGTATCTCCGGTCTCATATATGAGGAGACCCATGCAGTGCTGAAGATCTTTTTGG 91908 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || | | |||| | || ||| ||||||||||| | | |||||| |||| Sbjct 91909 AGAATGTGACTCGTGATTCCATCACCTACACCGAGCACGCCAGGAGAAAGACTATCACTG 91968 Query 16638 CCATGGATATCGTCTATGC 16656 | ||||| || || ||||| Sbjct 91969 CTATGGACATTGTTTATGC 91987 >seq26278 Length=121055 Score = 80.6 bits (88), Expect = 4e-11 Identities = 137/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 ||||||||||||| || ||||| ||||| ||||| | | || |||| | | ||| | | Sbjct 101858 GAGATAACATCCAGGGCATCACTAAGCCCGCTATTCACAGGCTTGCTCATAGAGGTTGTG 101917 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||| |||| | || ||||||| |||| ||| || ||||||||||| | Sbjct 101918 AAAAGCGTATCTCCAGTCTGATCTATGAGGAGACCCGTAGAGTGCTGAAGATCTTCTTAG 101977 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || | ||||| || || ||| || ||| | | | | || ||| |||| Sbjct 101978 AGAATGTGACTCATGACTCTGTCACCTACACTGAGTATACCAGGAGAAATACTATCACTG 102037 Query 16638 CCATGGATATCGTCTATGC 16656 | |||||| | ||||||| Sbjct 102038 CTATGGATGTTTTCTATGC 102056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79044229678989