Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq24612 116 4e-21 >seq24612 Length=73035 Score = 116 bits (128), Expect = 4e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 ||| || ||||||||||| ||||||||||| || || || || ||||| || || || Sbjct 59403 CAAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGT 59462 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||| ||||||||||| || | |||||| |||||||||||||| || ||| ||||| Sbjct 59463 TAATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAA 59522 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 |||||| || || || |||||| || || || || || Sbjct 59523 GAAAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTC 59561 Score = 82.4 bits (90), Expect = 8e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 21168 TTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTC 21227 ||||||||| | ||| ||||| || | |||||| || || || ||||| ||||| | Sbjct 59099 TTGACATAACTGAAGCTTTCTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCC 59158 Query 21228 CTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTAC 21287 ||| || || ||||| ||||||||||||| | || || | || || | | Sbjct 59159 CTTGTAAGCTAATCAGCTCCATCCAATCAAATGGATTCTGAGCATTGTACATCTTGTCAT 59218 Query 21288 AACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCAC 21347 |||||| | || ||||| || || ||||||||||| ||| || ||| || || | Sbjct 59219 AACCCAAAGCATCCAACAATCTGTCAGCCACAAATTCTATGTATGTACTCATCAAATCTC 59278 Query 21348 AATTCATACC 21357 ||||||||| Sbjct 59279 CATTCATACC 59288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531675586552520