Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq24549 91.5 1e-13 seq22151 87.8 2e-12 seq23168 86.0 6e-12 >seq24549 Length=72154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TCA 26825 ||||| | ||||| || ||| | |||||||| | |||||| | || ||||| ||| Sbjct 58280 ATGCAGATCTTTGTTAAGACACTGACTGGAAAGACTATCACCCTGGAGGTAGAAAGTTCA 58339 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||| || | || ||| |||||| |||||||||||||| || || || Sbjct 58340 ---GACACCATTGATAATGTGAAAGCAAAGATCCAAGACAAAGAAGGGATTCCACCAGAC 58396 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | | |||| | ||||| || || || |||| || | | || || Sbjct 58397 CAGCAGCGTTTAATTTTTGCTGGCAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTAC 58456 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| || ||||| || || ||||| |||| || |||| |||||||||| Sbjct 58457 AACATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGACTGAGAGGAGGAA 58508 >seq22151 Length=46047 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 26857 TTACC--GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACA 26914 ||||| |||||||||||||||||||| || || || ||||| |||| | || ||||| Sbjct 13852 TTACCAGGACAAAGAAGGGATACCTCCTGACCAGCAGAGACTAATTTTTGCTGGAAAACA 13911 Query 26915 ACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCT 26974 | ||||||| | ||| | || || ||||| || |||||||| || | || || Sbjct 13912 GTTGGAAGATGGTCGAACTCTGGCTGATTACAACATCCAGAAAGAATCAACACTTCACCT 13971 Query 26975 GGTCCTGAGACTTAGAGGAGGAAAAATATGATTA 27008 ||| |||| || || ||||| || |||||||| Sbjct 13972 GGTTTTGAGGCTGAGGGGAGG--AACTATGATTA 14003 >seq23168 Length=55519 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || |||||||| | || | || || Sbjct 53946 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCT 53887 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||||||||| | |||||| ||||| ||||| |||||||| || || || Sbjct 53886 TCTGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGAC 53827 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || | |||| || ||| || || || || |||| | | | | |||||| Sbjct 53826 CAGCAGCGATTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTTGCCGACTAC 53767 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| ||||||| || || Sbjct 53766 AACATCCAGAAGGAGTCAACTCTCCATCTCGTGCT 53732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478459728356560