Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq24630 111 4e-19 seq26075 91.5 4e-13 seq24612 86.0 2e-11 >seq24630 Length=73539 Score = 111 bits (122), Expect = 4e-19 Identities = 159/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| ||| || ||||| || | |||||| |||||| | |||||| ||||| | Sbjct 27829 ATGAAGGATGATAGTATTGAGGGCATATATGACACTCTTAAGGAATGTGCTGTTATTAGC 27888 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || || || |||||||||||||| | ||||| | ||||| || | |||||||| Sbjct 27889 AAATCAGCTGGGGGAATTGGTGTATCTGTGCACAACATACGTGCTACTG-GGAGTTACAT 27947 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| ||| || ||||| | || || ||||| ||||| ||| | |||| Sbjct 27948 TCGTGGAACAAATGGAACATCAAATGGAATTGTGCCTATGCTGCGTGTATTTAATGATAC 28007 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| || || || ||||| || || || || | |||||| Sbjct 28008 TGCCAGATATGTTGACCAAGGGGGCGGCAAAAG-AAAGGG 28046 >seq26075 Length=110386 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/137 (75%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 111689 TCATCTTATG-TGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGC 111747 ||||||| || | ||||||||||| | | ||| ||| || || || |||||||||| Sbjct 15892 TCATCTTGTGGTTGTAGTTTTATGTAGCCAATGGGGAGCTATCCTGTCAGATGTATCAGC 15951 Query 111748 GATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTT 111807 ||||||| ||||| ||| | || || || ||||| |||||| ||| ||| | || || | Sbjct 15952 GATCTGCGGATATGGGTTTGGGAGTACCATTTAACATTGCATCTTATGCATTGCTGACAT 16011 Query 111808 GCTTAATCGCTCATTTT 111824 || | || |||||| || Sbjct 16012 GCATGATAGCTCATGTT 16028 >seq24612 Length=73035 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542 ||||| || ||| | | || |||||| || ||||| ||||||||||| ||| || Sbjct 59567 TTCGCAGAGCGTTTGGTGGCTTTTGCTTGTGTAGAAGGGATTTTCTTTTCCGGAAGTTTC 59508 Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602 ||| |||| |||||| | ||||| || | | ||||| || |||| || || |||||| Sbjct 59507 TGTTCAATATTTTGGTTGAAAAAGCGGGGGTTAATGCCCGGATTAACTTTCTCGAATGAG 59448 Query 22603 TTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA 22652 || ||| |||| || ||| | || ||||||||||| |||| || Sbjct 59447 TTGATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGCTTGCTTTA 59398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302787947388686