Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq23085 95.1 1e-14 seq24549 89.7 4e-13 seq23505 87.8 2e-12 seq24416 84.2 2e-11 seq10662 84.2 2e-11 >seq23085 Length=54704 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 24006 AAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAA 24065 ||||| ||||||||||| |||||| ||||||| ||| |||||||| |||||| | Sbjct 27743 AAAACCCTAACTGGAAAAATCATTACCCTCGAAGTTGAGAGCAACGACAACATCGATAAT 27802 Query 24066 GTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGA 24120 ||||| || ||| || ||||||| ||||||||| ||||| |||||||||| Sbjct 27803 GTCAAGGCCAATATTTAGGATAAAGAAGTCATACCTCCTGATCAGCAGAGACTGA 27857 >seq24549 Length=72154 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA--GGCCA 24048 ||||| | ||||| || ||| | |||||||| | || ||| | || || || | || Sbjct 58280 ATGCAGATCTTTGTTAAGACACTGACTGGAAAGACTATCACCCTGGAGGTAGAAAGTTCA 58339 Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 |||||||| || | || ||| |||||| ||||||||||| || || || || | Sbjct 58340 --GACACCATTGATAATGTGAAAGCAAAGATCCAAGACAAAGAAGGGATTCCACCAGACC 58397 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 | ||| | | |||| | |||||||| || || |||| || | | ||||| | Sbjct 58398 AGCAGCGTTTAATTTTTGCTGGCAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTACA 58457 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||| || ||||| || ||| | ||||| ||| | || ||||||||||| Sbjct 58458 ACATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGACTGAGAGGAGGA 58507 >seq23505 Length=59109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || | |||||| | || || ||| | | Sbjct 2896 ATGCAAATCTTTGTGAAGACCTTCACCGGGAAGACCATTACCCTGGAGGTTGAGAGCTCC 2837 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || || || || || || || Sbjct 2836 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 2777 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | || ||||| || || |||| | | | | | ||||| ||| Sbjct 2776 CAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGATTACAAC 2717 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || ||||| || || || |||| || ||| | || |||| |||||| Sbjct 2716 ATCCAAAAGGAGTCGACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGA 2669 >seq24416 Length=70076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG-GCCAA 24049 |||||| | ||||| || || || ||||| || | |||||| | ||||| || | Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAAAGTTCT 31646 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| || | || || |||||| ||||||||||| || || || || || Sbjct 31647 CGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCA 31706 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || || |||||| | || ||||| | ||||||| |||| | ||||| || Sbjct 31707 GCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTACAA 31766 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 ||||| || ||||| || ||||| | ||||| || Sbjct 31767 TATTCAGAAGGAATCGACCCTTCATCTTGTGTTGAG 31802 >seq10662 Length=13073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | |||||||| | || || |||| |||||| Sbjct 2028 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAGACCATCACTCTCGAGGTCGAGAGTTCT 1969 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| |||||| ||||| |||||||| || || || || Sbjct 1968 GACACCATCGATAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCCCCTGACCAG 1909 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGTCAGC-GATTATA 24168 ||||| ||||| | | ||| || || || ||||||| | ||| || | || || || | Sbjct 1908 CAGAGGCTGATCTTTGCCGGAAAACAGCTAGAAGATGGCCGAACACTT--GCTGACTACA 1851 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| ||||| || || || Sbjct 1850 ACATCCAAAAGGAGTCCAC 1832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429758510730315