Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq24416 98.7 8e-16 seq24549 96.9 3e-15 >seq24416 Length=70076 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| ||||| ||||||||||| || | || ||| | Sbjct 35439 ATGCAGATCTTTGTGAAAACCCTCACAGGAAAAACCATCACTCTTGAGGTGGAAAGCTCT 35498 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || ||| || ||| || || || ||| ||||| || || Sbjct 35499 GACACCATTG-ACAACGTGAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 35557 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||||| |||| ||| || || || || ||||||| | || | || || || || Sbjct 35558 GCAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTCGCTGACTACAA 35617 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 ||||| ||||| || ||| | ||| | |||||||| Sbjct 35618 TATTCAGAAAGAATCGACTCTTCATCTTGTGTTGAG 35653 >seq24549 Length=72154 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 |||| | |||||||| ||||| || || ||||| || || ||||| || |||| || Sbjct 57589 ATTATAGATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTTGA 57648 Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 | | |||||| ||| |||| || || ||| ||| || || ||||| | ||| Sbjct 57649 GAGCTCCGACACAATTG-ACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGAATTCCCC 57707 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||||||||||| | || | ||| || || |||||||| |||| | ||| | || | Sbjct 57708 CTGATCAGCAAAGGTTGATCTTTGCTGGAAAGCAATTAGAGGATGGTAGAACTCTTGCAG 57767 Query 115458 ATTATAACATTCAAAAAGAGTCTAC 115482 | |||||||| ||||| ||||| || Sbjct 57768 ACTATAACATCCAAAAGGAGTCCAC 57792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425168406432760