Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq23505 127 2e-24 seq23168 107 2e-18 seq24416 104 2e-17 seq26813 95.1 1e-14 seq24549 91.5 1e-13 seq26916 89.7 5e-13 seq18302 84.2 2e-11 >seq23505 Length=59109 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 |||||| || || | ||||||||||||||| ||||||||||| || |||||| || Sbjct 2456 CAGCACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCCAGGGTGCGGCCATC 2515 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||||||| || || |||| || | ||||||||| || |||||||| || ||||| Sbjct 2516 CTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGGATTCCCTCCTTGTC 2575 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||||| | || | || |||| | ||| | || | ||| | ||| Sbjct 2576 CTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATGGT 2635 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| || || || || ||||||||||| Sbjct 2636 CTTCCCGGTGAGGGTCTTGACAAAAATCTGCAT 2668 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 |||||| || || | ||||||||||||||| ||||||||||| || |||||| || Sbjct 2684 CAGCACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCCAGGGTGCGGCCATC 2743 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||||||| || || |||| || | ||||||||| || |||||||| || ||||| Sbjct 2744 CTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTC 2803 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||||| | || | || |||| | ||| | || | ||||| ||| Sbjct 2804 CTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGGGTAATGGT 2863 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| | || || || || || ||||| Sbjct 2864 CTTCCCGGTGAAGGTCTTCACAAAGATTTGCAT 2896 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| ||||| ||||| | ||| |||||||| || ||||||||||| ||| Sbjct 3126 CCACCACGGAGACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCT 3185 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| |||||||| || ||| | || | | ||||| ||||| || Sbjct 3186 -AGAGTACGTCCGTCCTCAAGCTGCTTTCCGGCGAAAATAAGCCTTTGCTGATCCGGGGG 3244 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || ||| || ||| | | || | ||||||| | ||| | Sbjct 3245 AATCCCTTCCTTATCCTGGATCTTAGCCTTAACGTTGTCAATTGTATCGGAGCTCTCCAC 3304 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || ||||||||||| |||||||| Sbjct 3305 CTCTAGGGTGATGGTCTTTCCGGTGAGTGTTTTTACGAAGATCTGCAT 3352 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||||||| || ||||||||||| Sbjct 2898 CCACCACGAAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 2957 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | |||||| || || |||| || | |||||||||||| || Sbjct 2958 AGGGTCCGGCCATCCTCAAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCCGGGGGA 3017 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| | || | Sbjct 3018 ATACCCTCCTTGTCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCGGAGCTTTCCACC 3077 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 3078 TCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 3124 >seq23168 Length=55519 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | || |||||||| || |||||||| ||| Sbjct 53717 CCACCACGGAGACGGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCA 53776 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| | || || ||||||||||| || || Sbjct 53777 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 53836 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || |||| | || | || || | ||||| | Sbjct 53837 ATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAAGACTCAACC 53896 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || ||||| ||||| ||||| |||||||| Sbjct 53897 TCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 53943 >seq24416 Length=70076 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| |||||||| || ||||||||||| Sbjct 35209 CCACCACGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCA 35150 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || |||||||| || || |||| | | ||||||||| ||||| Sbjct 35149 AGGGTCCGACCATCTTCGAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 35090 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | | || | Sbjct 35089 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCCACC 35030 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || ||||| |||||||||||||| Sbjct 35029 TCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACGAAAATCTGCAT 34983 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || ||||||||||| |||||||| || | Sbjct 32042 CCACCACGGAGACGGAGGACAAGGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCCGCC 31983 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || |||||||| ||||| |||| | | ||||||||| || ||| Sbjct 31982 AGAGTCCTACCATCTTCGAGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGCGGG 31923 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| || || ||||| | || | |||||| | ||| | Sbjct 31922 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATAGTATCAGAACTCTCCACC 31863 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| ||||| || | ||| || || ||||||||||| Sbjct 31862 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATCTGCAT 31816 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || || ||||| |||||||||||||| | Sbjct 35437 CCACCACGGAGACGGAGAACCAAGTGAAGAGTGGATTCCTTCTGAATGTTGTAATCAGCC 35378 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || ||||||||||| || |||| || | |||||||| ||||| Sbjct 35377 AGAGTACGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCTGGAGGA 35318 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | || || | || | Sbjct 35317 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACGTTATCAATGGTGTCAGAACTTTCCACC 35258 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| ||||| |||||||| Sbjct 35257 TCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTCACGAATATCTGCAT 35211 >seq26813 Length=197329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| || || | || | ||| |||||||| || |||||||| || ||| Sbjct 149225 CCACCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 149166 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || | | | ||||| |||||||| |||||| | || || ||||||||||| || || Sbjct 149165 AGTGTTCGTCCA-TCCTCAAGCTGCTTACCTGCGAAAATCAACCGCTGCTGGTCTGGTGG 149107 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| || || ||| | | || | || || | ||||| | Sbjct 149106 AATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCTGATGACTCTAC 149047 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || ||||| || || || || || || ||||||||| Sbjct 149046 CTCCAAGGTAATAGTCTTACCCGTCAGGGTCTTCACAAAGATCTGCATG 148998 >seq24549 Length=72154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| ||||| | || ||||| || || ||||||||||| | || | | Sbjct 58494 CGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCAAGAGTCCTCCCA 58435 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| || | ||||||||||||||||| || || || ||||||||| Sbjct 58434 TCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTG 58375 Query 131140 TCGGTGATTTTCTGCTT 131156 || ||| || ||||| Sbjct 58374 TCTTGGATCTT-TGCTT 58359 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| || || | || | ||| ||||||||||| ||||| || || Sbjct 58051 GCCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGC 57992 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | ||||| | ||| || || ||| |||| || | |||||| || ||||| Sbjct 57991 AAGAGTTCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGG 57932 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || |||||| ||||| | || | ||| |||| | ||| | Sbjct 57931 AATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAAC 57872 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| || || || || | ||||| || || ||||||||| Sbjct 57871 CTCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCATG 57823 >seq26916 Length=217370 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/213 (70%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||||| ||||| || || | || || |||||||| || || | ||| | ||| Sbjct 172009 AGCACTAGATGTAGAGTTGATTT-TTCTGGATGTTGTAGTCCACCAAGATGCAGCAATCC 171951 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || |||||||| || || | || | | |||||||| ||||||||||||||||||| Sbjct 171950 TCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCAAGAGGGATTCCTTCTTTGTC- 171892 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 || | | || | ||| | || | | |||| |||| | || || | ||| ||| Sbjct 171891 TTGTATCTTGGCCTTAGCATTGTCGATACTATCACTGGATTTGACTTCCAGAATAATGGT 171832 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| ||| |||||||| |||| |||||||| Sbjct 171831 TTTACTGGTCAGAGTTTTCACGAGTATCTGCAT 171799 >seq18302 Length=24432 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||||| ||| ||||| | || |||||||| || ||||| || || Sbjct 6483 CCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6542 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | || | ||||| || || || || || |||| |||||||||||||| || || Sbjct 6543 AGTGTCCTGCCA-TCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 6601 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 || || || ||||| ||| | | ||||| | | | || | ||||| | |||||| | Sbjct 6602 AATACCCTCCTTGTC-TTGAATCTTTGCTTTAACATTGTCAATGGTATCTGAGGACTCCA 6660 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 6661 CCTCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471812943880320