Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq24549 131 1e-25 seq18302 116 2e-21 seq8871 113 3e-20 seq14993 107 1e-18 seq24416 100 2e-16 seq26391 96.9 2e-15 seq23997 96.9 2e-15 seq23539 95.1 8e-15 seq1687 93.3 3e-14 seq24839 84.2 1e-11 seq26813 82.4 5e-11 seq15840 82.4 5e-11 >seq24549 Length=72154 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| || | |||| ||||| |||||||||| || || ||||||||||| |||| Sbjct 58280 TACCACCCCTTAGGCGCAGCACCAGATGAAGAGTGGATTCTTTCTGAATATTGTAGTCAG 58221 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| | || || | ||| ||||| ||||| || | | || ||||| | | Sbjct 58220 CAAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGAG 58161 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| |||||| ||||||| ||| ||||| | | ||| || ||||||| Sbjct 58160 GAATGCCTTCCTTGTCCTGAATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAA 58101 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | |||||||| || || ||||| |||||||| || ||||||||| Sbjct 58100 CCTCAAGGGTAATAGTCTTTCCAGTCAAAGTTTTCACAAAGATCTGCATG 58051 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || ||| | || | || || ||| ||||||||| || || || |||| Sbjct 58050 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCA 57991 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | | || || || ||||||||||| || || | | || ||||| | || Sbjct 57990 AGAGTTCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGA 57931 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| || || |||||| ||| ||||| | | ||| || || ||||| Sbjct 57930 ATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACC 57871 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || || || |||||||||||||| || ||||||||| Sbjct 57870 TCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCATG 57823 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||| || | ||||||||| || ||| ||| || || || ||||||| Sbjct 58510 CATT-CCTCCTCTCAGTCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAAT 58452 Query 38146 CAGACAAAACACGTTCG-TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| ||| | | | | || || | || || || ||||| |||| || || || || Sbjct 58451 CAG-CAAGAGTCCTCCCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCT 58393 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | ||||||||||| || ||| |||||||| | | || ||| |||| Sbjct 58392 GGTGGAATCCCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCAATGGTGTCTGAACTT 58333 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || | || ||||| || || |||| || || || || |||||||| Sbjct 58332 TCTACCTCCAGGGTGATAGTCTTTCCAGTCAGTGTCTTAACAAAGATCTGCAT 58280 >seq18302 Length=24432 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || |||||||||||||||||||| |||||| |||||| || || || || || | | Sbjct 6711 CCTCCCCTCAAACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTG-C 6769 Query 38151 AAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | | | | || || | ||||||||| ||||| || | || || || || | ||| Sbjct 6770 AAGAGTCCTCCCATCCTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 6829 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | || || ||||| ||| ||| || || || | | |||||| ||||||||| Sbjct 6830 AATACCCTCCTTGTCTTGAATCTTTGCTTTGACGTTGTCAATGGTATCTGAACTTTCAAC 6889 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||||||| || ||||| ||||| || || || || || ||||| Sbjct 6890 CTCCAATGTAATTGTCTTACCAGTCAACGTCTTGACAAAAATTTGCAT 6937 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || |||| ||||||||||||||| |||||| |||||| || || || || || | Sbjct 6481 TACCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTG 6540 Query 38149 ACAAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 ||| | | | || || | |||||| || ||||| || | || || || || | | Sbjct 6541 -CAAGTGTCCTGCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGG 6599 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || ||||| ||| ||| || ||||| | | |||||| || Sbjct 6600 GGAATACCCTCCTTGTCTTGAATCTTTGCTTTAACATTGTCAATGGTATCTGAGGACTCC 6659 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| ||||| || || |||| ||| |||||||| |||||||| Sbjct 6660 ACCTCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 >seq8871 Length=6089 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||||||| ||||||||| |||| | |||||||| Sbjct 2060 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGAGAATCTCGT 2001 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||| ||||||||||||||| || Sbjct 2000 TAATCCATTCATGCGCATCACTAATTAGATGATGA 1966 >seq14993 Length=24807 Score = 107 bits (118), Expect = 1e-18 Identities = 79/92 (86%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| |||||||||||||| ||||| || |||||||||||||| || |||||||| Sbjct 21844 AAGCCTGTTCCCTTGGCTGTTGTTTCACTTGATAGTAGATAGGGACAGTGGGAATCTCGT 21785 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGA 25988 |||||| |||||| || ||||||||||||||| Sbjct 21784 TAATCCATTCATGTGCATCACTAATTAGATGA 21753 >seq24416 Length=70076 Score = 100 bits (110), Expect = 2e-16 Identities = 161/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || || | | |||||| | |||||| || ||||| |||||||||||||||| Sbjct 31816 TACCCCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCAG 31757 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || | | | || || || || || || ||||| || | | ||| || || | | Sbjct 31756 CCAGTGTTCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGTG 31697 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC-TCCACTTTCA 38267 ||| |||||||||||| ||| || ||| ||||| | | || || |||||| Sbjct 31696 GGATACCTTCTTTGTCCTGAATCTTGGCCTTAACATTGTCAATGGTGTCGAGAACTTTCC 31637 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| | |||||||| || || |||||||| ||||| || || ||||| Sbjct 31636 ACTTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 31587 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||| ||||||||| ||||| ||||| |||||||||| | Sbjct 35437 CCACCACGGAGACGGAGAACCAAGTGAAGAGTGGATTCCTTCTGAATGTTGTAATCAGCC 35378 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | ||| |||| || | || || |||||||| || | | ||| || || | || Sbjct 35377 AGAGTACGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCTGGAGGA 35318 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| || ||| || || ||| || || | | || || |||||| || Sbjct 35317 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACGTTATCAATGGTGTCAGAACTTTCCACC 35258 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || || | ||||||||||||||||||||| Sbjct 35257 TCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTCACGAATATCTGCAT 35211 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| || || ||||||||||| |||| | | | | | || Sbjct 35651 CAACACAAGATGAAGAGTCGATTCTTTCTGAATATTGTAGTCAGCGAGAGTCCTTCCATC 35592 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || || || || ||||| || || | ||| || || | ||||| ||| || ||||| Sbjct 35591 TTCCAACTGCTTACCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGGATGCCCTCCTTGTC 35532 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||| || ||||| || | | || || ||||| || || | || || || Sbjct 35531 CTGAATCTTGGCTTTCACGTTGTCAATGGTGTCAGAGCTTTCCACCTCAAGAGTGATGGT 35472 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| || || | ||||||||| || |||||||| Sbjct 35471 TTTTCCTGTGAGGGTTTTCACAAAGATCTGCAT 35439 >seq26391 Length=140564 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 140215 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 140156 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 140155 GCCCGTATTTAGCCTT 140140 >seq23997 Length=74762 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 5526 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 5585 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 5586 GCCCGTATTTAGCCTT 5601 >seq23539 Length=73515 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 |||| |||||||||| |||||||| ||| ||||||||| |||| | |||||| Sbjct 61315 AAGCATGTTCCCTTGGTTGTGGTTTTGCTGGATAGTAGACAGGGACAGTAGGAATCTCAG 61374 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||| ||||||||||||||||||||| Sbjct 61375 TAATCCATTCATGAGCGTCACTAATTAGATGACGA 61409 >seq1687 Length=2128 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||||| | Sbjct 405 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGATACTTGTTCGCTATCGGTCTCTC 346 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 345 ACTCGTATTTAGCCTT 330 >seq24839 Length=78981 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| | |||||||| ||||||| ||||||||| ||||||||||||||||| |||||| Sbjct 62340 CTCTTTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATTGGTCTCTG 62281 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 62280 GCCTGTATTTAGCCTT 62265 >seq26813 Length=197329 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||| |||||| || || ||||| |||| | ||| | || || | || Sbjct 149201 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCAAGCTGC 149142 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || | || || || || | || | |||||| |||||| ||| || Sbjct 149141 TTACCTGCGAAAATCAACCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCTTA 149082 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| ||||| | || || ||| || || || || |||||||| ||||||||| Sbjct 149081 GCCTTAACATTGTCGATGGTGTCTGATGACTCTACCTCCAAGGTAATAGTCTTACCCGTC 149022 Query 38295 AAGGTTTTCACGAATATCTGCATGTTTTAC 38324 | ||| ||||| || |||||||||||| || Sbjct 149021 AGGGTCTTCACAAAGATCTGCATGTTTCAC 148992 >seq15840 Length=22139 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| | ||||||||||| ||||||| || ||||||||| |||| || ||||| | Sbjct 13486 AAGCTCATTCCCTTGGCTATGGTTTCACTGGATAGTAGACAGGGACAGTGGGAATCTTAT 13545 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| | | |||| || ||||||||||||||| || Sbjct 13546 TAATACATCCATGTGCATCACTAATTAGATGATGA 13580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334808924689463