Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq24612 187 3e-42 seq24144 91.5 2e-13 seq26987 87.8 2e-12 seq23492 86.0 7e-12 seq23992 84.2 2e-11 seq26354 82.4 8e-11 seq25326 82.4 8e-11 seq25254 82.4 8e-11 seq25190 82.4 8e-11 >seq24612 Length=73035 Score = 187 bits (206), Expect = 3e-42 Identities = 573/874 (66%), Gaps = 13/874 (1%) Strand=Plus/Plus Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||| || || ||||||||| | || ||||||||||| ||||| |||| || ||| Sbjct 59115 TTTCTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAGCTAATCAG 59174 Query 92862 ATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 | || | | | |||||||| || || || ||| ||| ||| | | ||| Sbjct 59175 CTCCATCCAATCAAATGGATTCTGAGCATTGTACATCTTGTCATAACCCAAAGCATCCAA 59234 Query 92920 TAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAG 92979 ||||| ||||| |||||||||||||| | ||||||||| | |||||| || | || Sbjct 59235 CAATCTGTCAGCCACAAATTCTATGTATGTACTCATCAAATCTCCATTCATACCCACCAG 59294 Query 92980 ACGTACAGGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038 || ||||| ||||| || || || || | || || | || || ||| | || Sbjct 59295 -CGCACAGGGCAGAGCATCACACACAAACTCCCTTTCTATCTCCACAGCCTCTGCAACGA 59353 Query 93039 TTTCTATTACTCTACTATTTGGTGGTTTTTGTACG-ACATAATTGTACATTAAGCACGCA 93097 || | | |||| | || || || | | || |||| | ||||||||| Sbjct 59354 TTCCCCTGACTCGT-TCCCCAGTCAGCTTCGTCCTCAGCAAACTGTAAAGCAAGCACGCA 59412 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157 || || || ||||||||||||| ||| ||||||||||| ||| ||||| || || Sbjct 59413 AAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTTAATCCGGGC 59472 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 | | || || || || | ||||||||||||| ||||| || ||||| || || ||| Sbjct 59473 ATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAGAAAATCCCT 59532 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCAT 93277 || || ||||| ||||| | ||| || || || || | || | |||||| Sbjct 59533 TCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTTTCAGA---GCCATCGATCCAA 59589 Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG-CGTTAAATAG 93336 | ||||| | || || || | || |||||| | || ||||| | | || | Sbjct 59590 CGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTGCCCGGAACAAC 59649 Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396 || ||| ||||| || || ||||| | || | | || | ||||| || || Sbjct 59650 CTACTCT-TTTCGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGTACATCTCGGA 59708 Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456 ||||| |||||| || || ||||||||||| |||||| | || || | | || || Sbjct 59709 ATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCACGCGCCTCAGCAACTTGGAC 59768 Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516 |||| || || | |||| || || || || || || || || |||||||| Sbjct 59769 ATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAGGCAGCAAAAAA 59828 Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAG 93576 || | | ||| | || ||||| | ||| | | | || || ||||||| | || Sbjct 59829 CGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAAT-GACGAG 59887 Query 93577 -ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACA 93635 ||| || |||||||||||||| | ||||| || ||||| ||||| ||||||| Sbjct 59888 TATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCATAGCTTTCTTGTACA 59947 Query 93636 TATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 | ||||| || | | | || |||||||| || || Sbjct 59948 TTTCCCAAATTTGTGGGTACTGAATTGGGAACAT 59981 >seq24144 Length=66625 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/90 (83%), Gaps = 6/90 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 37386 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 37329 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||| || ||||| ||||||||| Sbjct 37328 GCGTGGGTTCAAATCCCACTTCTGACAAAT 37299 >seq26987 Length=312900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 6/105 (6%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCG----GGAG 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| | | Sbjct 272180 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAAAAAGGG 272123 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||||||||| || ||||| |||||| ||| || || | ||||| Sbjct 272122 CGTGGGTTCAAATCCCACTTCTGACAGATTTTTTTTTCATTTTTT 272078 >seq23492 Length=58984 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 56470 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 56527 Query 126328 TTCGAACCCCACACCTGACAAATT 126351 ||| || |||||| ||| |||||| Sbjct 56528 TTCAAATCCCACAGCTGTCAAATT 56551 >seq23992 Length=84447 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/97 (80%), Gaps = 8/97 (8%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GGGAG 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| |||| | | | Sbjct 19405 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTAAGAGGG 19348 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTG 126358 ||||||||| || ||||| ||||| |||||| ||| Sbjct 19347 CGTGGGTTCAAATCCCACTTCTGAC--ATTATTTTTG 19313 >seq26354 Length=127045 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GGGA 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| |||| | | Sbjct 93177 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTAAGAGG 93234 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 93235 GCGTGGGTTCAAATCCCACTTCTGACA 93261 >seq25326 Length=105323 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 70534 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 70591 Query 126325 GGGTTCGAACCCCACACCTGACA-AATTATTATT 126357 |||||| || |||||| ||| || |||| || || Sbjct 70592 GGGTTCAAATCCCACAGCTGTCATAATTTTTTTT 70625 >seq25254 Length=98131 Score = 82.4 bits (90), Expect = 8e-11 Identities = 81/104 (78%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | ||| Sbjct 41444 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTAAGAGGGCG 41503 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTG 126367 ||||||| || ||||| |||||| || || || | |||||| Sbjct 41504 TGGGTTCAAATCCCACTTCTGACATTTTTTTTTTCCATTTTTTG 41547 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/113 (79%), Gaps = 5/113 (4%) Strand=Plus/Plus Query 126258 TATT-TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCC 126314 |||| || ||||||| ||||||||||||||||||||||||| | ||| ||||| ||| Sbjct 47491 TATTGTAAAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGT 47550 Query 126315 TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGA-ATTTTT 126366 | | |||||||||| || ||||| ||||| | ||||| || | |||||| Sbjct 47551 AAGAGGGCGTGGGTTCAAATCCCACTTCTGAC-ATTTATTTTTTTATATTTTT 47602 >seq25190 Length=83537 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/92 (80%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 126258 TATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCT 126315 ||| || ||||||| ||||||||||||||||||||||||| | ||| ||||| ||| Sbjct 75851 TATGTAAAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTA 75792 Query 126316 CGGGAGCGTGGGTTCGAACCCCACACCTGACA 126347 | | |||||||||| || ||||| |||||| Sbjct 75791 AGAGGGCGTGGGTTCAAATCCCACTTCTGACA 75760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556625018176520