Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq24416 87.8 2e-12
>seq24416
Length=70076
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/217 (69%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG- 111245
|||||||| ||||| || || |||| ||||| || |||||| | ||| |||| ||
Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAA---AGT 31643
Query 111246 ---CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302
||| | ||| | | || || || ||| ||||||||||| | || ||
Sbjct 31644 TCTCGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGA 31703
Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362
|| |||||| | |||| ||| || || || ||||||||| | ||| |||| |||||
Sbjct 31704 CCAGCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTA 31763
Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399
||||| || || ||||| || || ||| | ||||||
Sbjct 31764 CAATATTCAGAAGGAATCGACCCTTCATCTTGTGTTG 31800
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||| || || || | || ||||| ||||| || |||| |||| |
Sbjct 35667 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAGGTGGAAAGCTCT 35726
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | | | | | || || || ||| ||||| || ||| ||||| ||||||
Sbjct 35727 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAA 35786
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| || |||| ||| || || || ||||||||| | ||| |||| ||||| ||
Sbjct 35787 CAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTGGCTGATTACAAC 35846
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || || ||||| || || || || || | ||||| || |||||
Sbjct 35847 ATCCAGAAGGAATCAACCCTTCACTTGGTCCTCCGTCTCCGTGGTGG 35893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422865357586600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |