Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq24612 120 6e-22 >seq24612 Length=73035 Score = 120 bits (132), Expect = 6e-22 Identities = 347/527 (66%), Gaps = 18/527 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || || || || ||||| |||||||| || |||||||| || ||||||||| Sbjct 59834 CTTGCGTTTTTTGCTGCCTCAGACGGCATCGTTTTAGAGAACCTCGCTGGAAGGTTCATG 59775 Query 42483 AAAGAGGTGCAGTACTT--TGAGGCGCGCTGC-TTCTACGGCTTCCAGATAGCCATAGAG 42539 ||||| || || | || ||||||||| ||| ||||| || ||||| || ||||| ||| Sbjct 59774 AAAGATGTCCA--AGTTGCTGAGGCGCG-TGCTTTCTATGGATTCCAAATCGCCATTGAG 59718 Query 42540 AACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCG-- 42597 || | || || ||| ||||| ||| | | |||||||| ||| | | || Sbjct 59717 AATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTACATCAAGGACTCTGACGAA 59658 Query 42598 -AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 || ||| || ||||| ||| || ||||| || || || | | ||||||||| | Sbjct 59657 AAGAGTA---GGTTGTTCCGGGCAATCGAGACTATCCCTTGTGTTGAAAAGAAGGCGAAG 59601 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 ||||| || |||||||| | | || ||| |||| ||| | |||| || ||| Sbjct 59600 TGGGCCCTTCGTTGGATCGATGGCTCTGA---AACCTTCGCAGAGCGTTTGGTGGCTTTT 59544 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | || || || || ||||| || || ||| || || || ||| | || || Sbjct 59543 GCTTGTGTAGAAGGGATTTTCTTTTCCGGAAGTTTCTGTTCAATATTTTGGTTGAAAAAG 59484 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 || || ||||||||| | || |||||||| || | || || ||||| || || Sbjct 59483 CGGGGGTTAATGCCCGGATTAACTTTCTCGAATGAGTTGATTTCAAGAGACGAAGGTTTG 59424 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAG 42896 || | || ||||| ||| | || | | || || ||| |||| | ||| Sbjct 59423 CACTGTGATTTTGCGTGCTTGCTTTAC---AGTTTGCTGAGGACGAAGCTGACTGGGGAA 59367 Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 || ||| ||| ||| | | ||||| |||||||| || | |||||| Sbjct 59366 CGAGTCAGGGGAATCGTTGCAGAGGCTGTGGAGATAGAAAGGGAGTT 59320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943939354978480