Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq18302 114 1e-20 seq23168 91.5 1e-13 seq26813 87.8 2e-12 seq10662 87.8 2e-12 seq24416 82.4 8e-11 >seq18302 Length=24432 Score = 114 bits (126), Expect = 1e-20 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | || |||||| || ||||| | | |||||||| || ||||| ||||| Sbjct 6483 CCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6542 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | ||||| ||||||||||| | | |||| | |||||| ||||| || || Sbjct 6543 AGTGTCCTGCCA-TCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 6601 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | |||| |||| |||| || | ||| || | |||||| Sbjct 6602 AATACCCTCCTTGTC-TTGAATCTTTGCTTTAACATTG-TCAATGGTATCTGAGGACTCC 6659 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || |||||||| || || || || |||||||| Sbjct 6660 ACCTCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| | || || || || || ||||| |||| | Sbjct 7428 GACTCCTTTTGGATGTTGTAGTCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTTCCGGCA 7487 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| ||||| || || || ||||| ||||| ||| |||| | ||||| Sbjct 7488 AAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTC-TTGAATTTTAGCTTTAAC 7546 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||| ||||| | || | || || ||||| || || || Sbjct 7547 ATTATCGATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTTCCAGTGAGCGTCTT 7606 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 7607 AACAAAGATCTGCAT 7621 >seq23168 Length=55519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| | ||| || ||||| || || || |||| Sbjct 53748 TTGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTCAAGCTGCTTTCCGG 53807 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | || | ||||| ||||| || || || ||||| ||||| ||| || ||| | Sbjct 53808 CGAAAATCAATCGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGGATCTTGGCTTTGA 53867 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||| | ||||| ||||| | || | ||| || || || || ||| Sbjct 53868 CATTG-TCGATGGTGTCAGAAGACTCAACCTCTAGGGTGATCGTCTTCCCCGTTAGGGTT 53926 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 53927 TTCACGAAGATCTGCAT 53943 >seq26813 Length=197329 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| ||| | || || ||||| || || ||||| | Sbjct 149192 GACTCCTTCTGGATGTTGTAGTCAGCT-AGTGTTCGTCCATCCTCAAGCTGCTTACCTGC 149134 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 | || | ||||| ||||| || || || ||||| ||||| ||| | || | ||| Sbjct 149133 GAAAATCAACCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTC-CTGAATCTTAGCCTTAA 149075 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||| | ||||| ||||| | || | || ||||| ||||| || Sbjct 149074 CATTG-TCGATGGTGTCTGATGACTCTACCTCCAAGGTAATAGTCTTACCCGTCAGGGTC 149016 Query 138598 TTTACAAAAATCTGCATG 138615 || ||||| ||||||||| Sbjct 149015 TTCACAAAGATCTGCATG 148998 >seq10662 Length=13073 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| | || || || || || ||||| |||| | Sbjct 1835 GACTCCTTTTGGATGTTGTAGTCAGCAAGTGTTCGGCCATCTTCTAGCTGTTTTCCGGCA 1894 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| ||||| || || || ||||| ||||| ||| | || | ||||| Sbjct 1895 AAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTC-TTGAATCTTAGCTTTAAC 1953 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||| ||||||| || | || || ||||| || || || Sbjct 1954 ATTATCGATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTTCCAGTGAGCGTCTT 2013 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 2014 AACAAAGATCTGCAT 2028 >seq24416 Length=70076 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| || ||| | || ||||| || || || | | Sbjct 32009 GACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTACCATCTTCGAGCTGCTTCCCTGCA 31950 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || | ||| ||||| || || || || || ||||| ||| | || | || Sbjct 31949 AAGATCAGCCTCTGCTGGTCTGGCGGGATTCCCTCCTTGTC-CTGAATCTTAGCCTTGAC 31891 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | || || | ||||||||| | || | || |||||||||| ||| | Sbjct 31890 ATTG-TCAATAGTATCAGAACTCTCCACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCT 31832 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||||||||| Sbjct 31831 TGACAAAAATCTGCAT 31816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496052276296560