Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq18302 113 3e-20 seq24549 109 4e-19 seq10662 93.3 3e-14 seq26813 89.7 4e-13 seq24416 89.7 4e-13 >seq18302 Length=24432 Score = 113 bits (124), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || ||||| || || || || || || ||||| || || ||| | ||| | || Sbjct 6726 AACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTCCTCCCATCC 6785 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | |||||| ||||| | ||||||||||| ||||| ||||| || |||||||| Sbjct 6786 TCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 6845 Query 15085 CAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 ||| ||||| ||| || | || || ||||| | |||| || || || ||||| || Sbjct 6846 TGAATCTTTGC-TTTGACGTTGTCAATGGTATCTGAACTTTCAACCTCCAATGTAATTGT 6904 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||| || || ||||||||||||||| Sbjct 6905 CTTACCAGTCAACGTCTTGACAAAAATTTGCATA 6938 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || ||||| || ||||||||||| || | || | || || | ||| Sbjct 6963 TGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAGGGTCCTTCCATCCTCAAGTTGC 7022 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || ||||| | |||| | ||| ||||| ||||| || |||||||| || ||| Sbjct 7023 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTT 7082 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| ||| | || |||||||| | | || || || || ||||| || || ||||| Sbjct 7083 GC-TTTAACATTGTCAATAGTATCTGAACTCTCGACCTCCAAAGTAATTGTCTTCCCTGT 7141 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| ||||||||| Sbjct 7142 CAATGTCTTAACAAATATTTGCATA 7166 >seq24549 Length=72154 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || || | || ||||| || || || ||||| || ||||||||||| Sbjct 58506 CCTCCTCTCAGTCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 58447 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | ||| | || || | || |||||||| | || |||||||| ||||| |||| Sbjct 58446 AGAGTCCTCCCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGA 58387 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||| ||||| || ||||| ||| ||| | || || || || | ||||||| Sbjct 58386 ATCCCTTCTTTGTCTTGGATCTTTGC-TTTCACATTATCAATGGTGTCTGAACTTTCTAC 58328 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| || || || || ||||| || || ||||| || |||||| Sbjct 58327 CTCCAGGGTGATAGTCTTTCCAGTCAGTGTCTTAACAAAGATCTGCATA 58279 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| |||| | | || | || ||||| || || ||||| ||||| || || Sbjct 57824 TGCCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCTG 57765 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| |||| | || |||||||| || ||||| | ||||| | || || || | Sbjct 57764 CAAGAGTTCTACCATCCTCTAATTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGGG 57705 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||||||||||||||| ||| ||||| || ||| | || || || ||| | || Sbjct 57704 GAATTCCTTCCTTGTCTTGAATCTTTGC-CTTGACATTGTCAATTGTGTCGGAGCTCTCA 57646 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | || ||||| || || || || || || ||||| |||||||| Sbjct 57645 ACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 57596 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| |||| | | || | || ||||| || || ||||| ||||| || || Sbjct 58052 TGCCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCAG 57993 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| |||| | || || || ||||| || ||| | ||||| | ||| || || | Sbjct 57992 CAAGAGTTCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAG 57933 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||||||||| || ||||| || ||| | || ||||| ||| | || | Sbjct 57932 GAATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAA 57873 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||||| || || || |||| ||||| ||||| || ||||| Sbjct 57872 CCTCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCAT 57824 >seq10662 Length=13073 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || ||||| || ||||||||||| || | || | || || | ||| Sbjct 1370 TGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAGGGTCCTTCCATCCTCAAGTTGC 1429 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || ||||| | |||| | ||| ||||| ||||| || |||||||| || ||| Sbjct 1430 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTT 1489 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| ||| | || |||||||| | | || || || || ||||| || || ||||| Sbjct 1490 GC-TTTAACATTGTCAATAGTATCTGAACTCTCGACCTCCAAAGTAATTGTCTTCCCTGT 1548 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| ||||||||| Sbjct 1549 CAATGTCTTAACAAATATTTGCATA 1573 >seq26813 Length=197329 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 || ||||| || || || || |||||||| || ||| || ||| | || || | || Sbjct 149201 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT-AGTGTTCGTCCATCCTCAAGCTG 149143 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || ||| | ||||| ||||| ||||| |||||| ||||||||||| ||| || Sbjct 149142 CTTACCTGCGAAAATCAACCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCTT 149083 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| | || || || || ||||| || |||||||| || ||||| || Sbjct 149082 AGCCTTAACATTGTCGATGGTGTCTGATGACTCTACCTCCAAGGTAATAGTCTTACCCGT 149023 Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180 ||| || || ||||| || ||||| ||| Sbjct 149022 CAGGGTCTTCACAAAGATCTGCATGTTT 148995 >seq24416 Length=70076 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || || || || || || ||||||||||| ||| | | ||||||| Sbjct 31258 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGGCCGTCTTCA 31199 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || ||||| | |||| | ||| ||||| ||||| ||||||||||| Sbjct 31198 AGTTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 31139 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||| ||| | || || || ||| |||| || || | ||| ||||| || Sbjct 31138 ATCTTGGCTTTAACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTT 31079 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| ||||| || ||||| Sbjct 31078 CCAGTGAGGGTTTTAACAAAGATCTGCAT 31050 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 || || || ||||| |||||||| || ||| | || | ||||| | || || || Sbjct 36091 GTTGACTCCTTTTGGATGTTGTAGTCTGCCAGAGTCCTTCCATCTTCCAGCTGCTTCCCT 36032 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 ||| | |||| | ||| ||||| ||||| ||||||||||| ||| || || Sbjct 36031 GCGAAGATCAGTCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTC 35972 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| | || |||||||| | |||| || || | |||| |||||| || |||| || Sbjct 35971 ACATTGTCAATAGTATCAGAACTTTCCACCTCCAGAGTAACGGTTTTCCCAGTCAACGTC 35912 Query 15160 TTTACAAAAATTTGCAT 15176 || |||||||| ||||| Sbjct 35911 TTGACAAAAATCTGCAT 35895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357244458865805