Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq24549 118 1e-21 seq24416 113 4e-20 seq18302 95.1 1e-14 seq26813 84.2 2e-11 seq24483 84.2 2e-11 seq10662 84.2 2e-11 >seq24549 Length=72154 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||||||||| ||||| || | ||| || ||| || Sbjct 57804 ACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCTGCAAGAGTTCTACCATCCTCT 57745 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| ||||| || | ||||| | |||||| || || ||||| ||||| || |||||| Sbjct 57744 AATTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGGGGAATTCCTTCCTTGTCTTGA 57685 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || ||| |||| || | |||||||| ||| || |||||||| | || ||| Sbjct 57684 ATCTTTGCCTTGACATTGTCAATTGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTG 57625 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || || || ||||| ||||||||| Sbjct 57624 CCGGTGAGGGTCTTAACAAAGATTTGCATC 57595 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||||||||| ||||| || | ||| | ||| ||| Sbjct 58032 ACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCAAGAGTTCTTCCATCCTCC 57973 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || |||||||| ||| | ||||||| ||||| || || ||||| ||||| |||||||| Sbjct 57972 AACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGG 57913 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| |||| || | |||||||| ||| || || ||||||| || || Sbjct 57912 ATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCAAGAGTAATTGTCTTC 57853 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| ||||| || ||||| Sbjct 57852 CCAGTCAAGGTTTTCACAAAGATCTGCAT 57824 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 || ||| ||||| || || ||||| || || ||||| || || | ||| | ||| Sbjct 58264 CAGCACCAGATGAAGAGTGGATTCTTTCTGAATATTGTAGTCAGCAAGGGTACGACCATC 58205 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 || | ||| ||||| || | ||||| | ||||| || || ||||||||||| || || Sbjct 58204 CTCAAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGAGGAATGCCTTCCTTGTC 58145 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||||||| |||| || | ||||| || || || || || |||| || Sbjct 58144 CTGAATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCAAGGGTAATAGT 58085 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | |||||| ||||| || ||||| Sbjct 58084 CTTTCCAGTCAAAGTTTTCACAAAGATCTGCAT 58052 >seq24416 Length=70076 Score = 113 bits (124), Expect = 4e-20 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || | |||||||||||| ||||| || || |||||||| || ||||| ||||| Sbjct 31817 ATACCCCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCA 31758 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| || || || || | ||||| | ||||||||| || Sbjct 31757 GCCAGTGTTCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGT 31698 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCG-GAAGACTC 45289 || || |||||||| || ||||| || || | || | ||||||| ||| || Sbjct 31697 GGGATACCTTCTTTGTCCTGAATCTTGGCCTTAACATTGTCAATGGTGTCGAGAACTTTC 31638 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || |||| || ||||| || | || || ||||| ||||||||| Sbjct 31637 CACTTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCATC 31586 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | |||||||||||| ||||| || || ||||| || || ||||| || || Sbjct 35668 ATCCCTCCCCTGAGCCTCAACACAAGATGAAGAGTCGATTCTTTCTGAATATTGTAGTCA 35609 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| ||||| || || || || | |||| || ||||||||| || Sbjct 35608 GCGAGAGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTTTGCTGGTCTGGG 35549 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || ||| | || | || | |||||| || || Sbjct 35548 GGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCA-CGTTGTCAATGGTGTCAGAGCTTTC 35490 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||| | ||||| || || || ||||| ||||| || |||||| Sbjct 35489 CACCTCAAGAGTGATGGTTTTTCCTGTGAGGGTTTTCACAAAGATCTGCATC 35438 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || |||| ||||| ||||||||||| || || || Sbjct 36121 CCACCACGGAGACGGAGGACAAGGTGCAAAGTTGACTCCTTTTGGATGTTGTAGTCTGCC 36062 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| |||| || || |||||| | |||| || |||||||| || ||| Sbjct 36061 AGAGTCCTTCCATCTTCCAGCTGCTTCCCTGCGAAGATCAGTCTCTGCTGGTCTGGGGGA 36002 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 |||||||| || |||||||| || || | || | || || ||| || || Sbjct 36001 ATGCCTTCCTTGTCTTGAATCTTAGCCTTCACATTGTCAATAGTATCAGAACTTTCCACC 35942 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || |||||||| ||||| || || | || || |||||||| |||||| Sbjct 35941 TCCAGAGTAACGGTTTTCCCAGTCAACGTCTTGACAAAAATCTGCATC 35894 >seq18302 Length=24432 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 |||||| | ||| || || || ||||| ||||| ||||| || | || | ||| Sbjct 6725 CAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTCCTCCCATC 6784 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 || | ||||||||| || | ||||| || |||||||| || ||||| || || || || Sbjct 6785 CTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 6844 Query 45248 TTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306 |||||| ||| ||||| || | || | ||| || ||| || || || | |||| | Sbjct 6845 TTGAATCTTTGCTTTGA-CGTTGTCAATGGTATCTGAACTTTCAACCTCCAATGTAATTG 6903 Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || | || || |||||||||||||| Sbjct 6904 TCTTACCAGTCAACGTCTTGACAAAAATTTGCAT 6937 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||||||||| || || || | ||| ||| || Sbjct 7413 ACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGTGTTCGGCCATCTTCA 7472 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||||| || | |||| | |||||||| || || |||||||| || |||||| Sbjct 7473 AGCTGTTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGA 7532 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | || | |||||| ||| |||||| || ||||| | || || Sbjct 7533 ATTTTAGCTTTAACATTATCGATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTT 7592 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || || ||||| || |||||| Sbjct 7593 CCAGTGAGCGTCTTAACAAAGATCTGCATC 7622 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| | ||||| || || || ||||| || ||| | ||| | ||| || Sbjct 7185 ACAAGATGTAAGGTTGACTCTTTCTGAATATTGTAGTCGGCCAGGGTCCTTCCATCCTCA 7244 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || || | ||||| | |||||||| || ||||| || || ||||||||| Sbjct 7245 AGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTTATCTTGA 7304 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || ||| ||||| || | ||||| ||| ||| ||||| || || | || || Sbjct 7305 ATCTTTGCTTTGACATTGTCAATTGTGTCTGAACTCTCAACTTCAAGGGTGATAGTCTTT 7364 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| || ||||| Sbjct 7365 CCAGTAAGTGTCTTGACAAATATCTGCAT 7393 >seq26813 Length=197329 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTC 45190 || || || || || || ||||| ||||| || || || ||| | ||| ||| || Sbjct 97324 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT-AGTGTTCGTCCATCCTC 97382 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | || || |||||| | ||||| | |||||||| || ||||||||||| || || || Sbjct 97383 GAGCTGCTTACCTGCGAAAATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTG 97442 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | |||||| || ||||| || || | |||| || || Sbjct 97443 GATCTTAGCCTTGACATTGTCAATGGTGTCAGATGACTCTACCTCTAAGGTAATAGTCTT 97502 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || || ||||| || ||||| Sbjct 97503 GCCCGTTAGGGTCTTCACAAAGATCTGCAT 97532 >seq24483 Length=75877 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | |||||||| || || || || |||||||| || || || || ||||| Sbjct 23929 TTCCTCCCCTGAGCCTCAGAACAAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCAG 23988 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | ||| | ||| ||||| ||||| || || |||||| || ||||| || || | Sbjct 23989 CCAAAGTTCGACCATCTTCCAACTGTTTCCCAGCAAATATCAGTCTCTGCTGATCAGGAG 24048 Query 45232 GAATGCCTTCTTTATCTTG 45250 | |||||||||||||| || Sbjct 24049 GTATGCCTTCTTTATCCTG 24067 >seq10662 Length=13073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 45141 AGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTT 45200 || || || ||||||||||| || || || | ||| ||| || | |||||| Sbjct 1829 AGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGTGTTCGGCCATCTTCTAGCTGTTTT 1888 Query 45201 CCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 45260 || || | |||| | |||||||| || || |||||||| || |||||||| || | Sbjct 1889 CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGAATCTTAGCT 1948 Query 45261 TTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGA 45320 || | || | |||||| ||| |||||| |||||||| | || || || || || Sbjct 1949 TTAACATTATCGATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTTCCAGTGAGC 2008 Query 45321 GTTTTTACAAAAATTTGCATC 45341 || || ||||| || |||||| Sbjct 2009 GTCTTAACAAAGATCTGCATC 2029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451811816195080