Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq21361 96.9 4e-15 seq24551 82.4 9e-11 >seq21361 Length=40015 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/271 (68%), Gaps = 14/271 (5%) Strand=Plus/Plus Query 10563 GAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAGTC 10622 |||||| |||||||||||||| | || | |||| ||| ||||| |||||||||||||| Sbjct 24424 GAATTACCGCGAATCCTATGGGATATTCGCGTGCAACGGGATTCTGTTCAACCACGAGTC 24483 Query 10623 ACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCA------CCGATGGTATCAAACA 10676 || ||||| || | |||||||||||| |||||| | ||| || | | | | Sbjct 24484 TCCTCGTCGGGGTGAGAATTTCGTGACAAGGAAGATAACCCGGGCCGTAGGGAGGATAAA 24543 Query 10677 AATCGTGGCGGGT-GAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACT 10735 ||||| | | |||| || | || |||||||| || | || ||| |||| Sbjct 24544 AATCG----GATTACAGAGCAAGGTGTTT---TTGGGGAATCTACAGGCGTCGAGAGACT 24596 Query 10736 GGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGG 10795 |||| || ||||| || ||||| |||||| | | || || ||||| | | | Sbjct 24597 GGGGCTTTGCTGGAGACTACGTAGAAGCAATGTGGATGATGCTACAGCAAGAGAAACCAG 24656 Query 10796 ACGAATATGTCGTCGCGACGGGGGAGACACA 10826 |||| || || || || |||| ||| |||| Sbjct 24657 ACGACTACGTTGTTGCAACGGAGGATTCACA 24687 >seq24551 Length=72183 Score = 82.4 bits (90), Expect = 9e-11 Identities = 189/280 (68%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 12791 GAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGG 12850 ||| |||||||| ||||||||||| |||||||| || || || | |||||||| | Sbjct 56433 GAACCCATCCATTTCAGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTTCC--A 56490 Query 12851 CATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATA 12908 | | | | || |||| | ||| | || || || ||||| || ||||| || || || Sbjct 56491 CCTCCAAGTCCTGCACCTCTCTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATG 56550 Query 12909 CACGGTTGATTTTCA-CGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 12967 || || || ||| | || ||||| | ||| | ||||| || || ||||| Sbjct 56551 CAAGG-TGCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGAAGCTCCCACACC 56609 Query 12968 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACC 13027 |||||||| ||| ||||| | | || | ||| || || || || | |||||| Sbjct 56610 CACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAACGGTACACCAGCTTCACC 56669 Query 13028 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 13067 || | |||| || | ||||||||||| || |||||| Sbjct 56670 AGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGGT 56709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613247433382680