Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq26813 116 4e-21 seq23168 111 2e-19 seq23505 109 6e-19 seq24416 98.7 1e-15 seq18302 96.9 4e-15 >seq26813 Length=197329 Score = 116 bits (128), Expect = 4e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | ||| || || | || ||||||||||| || ||||| Sbjct 97341 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGCTTACCTGCGAA 97400 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | || ||||||||| |||||| ||||| | Sbjct 97401 AATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 97460 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | || || || |||||||| || || || || Sbjct 97461 GTCAATGGTGTCAGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCAC 97520 Query 46582 AAAGATTTGCATTTTGCAC 46600 |||||| |||||||| ||| Sbjct 97521 AAAGATCTGCATTTTTCAC 97539 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | ||| || || | || || |||||||| || ||||| Sbjct 149190 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCAAGCTGCTTACCTGCGAA 149131 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || ||||||||| ||||| ||| | | Sbjct 149130 AATCAACCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATT 149071 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || |||| || || || || |||||||| || || || Sbjct 149070 GTCGATGGTGTCTGATGACTCTACCTCCAAGGTAATAGTCTTACCCGTCAGGGTCTTCAC 149011 Query 46582 AAAGATTTGCATTTTGCAC 46600 |||||| ||||| || ||| Sbjct 149010 AAAGATCTGCATGTTTCAC 148992 >seq23168 Length=55519 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | || |||||| ||||| |||||||||| |||||||| | Sbjct 53728 ACGGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACC 53787 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| |||||||| ||||| ||||||||||| | || | | ||||| Sbjct 53788 ATCCTCAAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATCCCTTCCTT 53847 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| |||| | | | ||||| || || || || | ||||| Sbjct 53848 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCTAGGGTGAT 53907 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || ||||| || ||||| || ||||| ||||| || Sbjct 53908 CGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 53946 >seq23505 Length=59109 Score = 109 bits (120), Expect = 6e-19 Identities = 145/198 (73%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| | || ||||| | || ||||||||||| || || || Sbjct 2249 CTCCTTCTGGATATTGTAGTCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 2308 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT--CTTCTTGAGC 46519 ||||| | ||||||||| | || | | |||||||||| ||||| ||| | Sbjct 2309 GATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTAGCTTTCACATT 2368 Query 46520 GTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 |||| | |||||| ||| ||||| |||| |||||||| || || || || || Sbjct 2369 GTCG--ATCGTGTCAGAACTC---TCCACCTCCAAGGTGATGGTCTTCCCTGTAAGGGTC 2423 Query 46577 TTAACAAAGATTTGCATT 46594 ||||||||||| |||||| Sbjct 2424 TTAACAAAGATCTGCATT 2441 Score = 102 bits (112), Expect = 9e-17 Identities = 141/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || | || ||||| | || || |||||||| || || || Sbjct 2477 CTCCTTTTGGATGTTGTAATCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAA 2536 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | ||| | | |||||||||| |||||| ||||| | Sbjct 2537 GATCAACCTCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2596 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || |||| |||||||| || || || || || || Sbjct 2597 GTCGATGGTGTCGGAGCTC---TCAACCTCCAAGGTGATGGTCTTCCCGGTGAGGGTCTT 2653 Query 46579 AACAAAGATTTGCATT 46594 ||||| || |||||| Sbjct 2654 GACAAAAATCTGCATT 2669 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || | || ||||| | || || |||||||| || || || Sbjct 2705 CTCCTTTTGGATGTTGTAATCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAA 2764 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 2765 GATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2824 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || |||| || ||||| || || || | || || Sbjct 2825 GTCGATGGTGTCGGAGCTC---TCAACCTCCAGGGTAATGGTCTTCCCGGTGAAGGTCTT 2881 Query 46579 AACAAAGATTTGCAT 46593 |||||||||||||| Sbjct 2882 CACAAAGATTTGCAT 2896 >seq24416 Length=70076 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | ||||| || |||| || || ||||| || || || Sbjct 31241 CTCCTTCTGGATGTTGTAATCTGCAAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAA 31182 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | ||||||||| | || | || ||||||||| |||||| ||| | | | Sbjct 31181 AATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGG-CTTTAACAT 31123 Query 46522 CGCCACCG-TGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || | ||||| |||||| || | |||||||| || || || || ||||||| Sbjct 31122 TGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTAA 31063 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 31062 CAAAGATCTGCAT 31050 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || |||||||||||| |||||||| | ||||| | | || ||| Sbjct 32024 ACAAGGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTACCATCTTCG 31965 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || |||| | ||||||||| | ||| | | |||||||||| Sbjct 31964 AGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGA 31905 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| ||||| | | | || || ||| ||||| |||| |||||||| Sbjct 31904 ATCTTAGCCTTGACATTGTCAATAGTATCAGAACTC---TCCACCTCCAAAGTGATGGTC 31848 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || ||||| || ||||| Sbjct 31847 TTACCAGTCAAAGTCTTGACAAAAATCTGCAT 31816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | || || || | || ||||||||||| || || || Sbjct 35174 CTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGACCATCTTCGAGCTGCTTCCCAGCAAA 35115 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | ||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 35114 GATCAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 35056 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| ||| |||||| || | |||||||| || || || || |||| Sbjct 35055 TGTCAATGGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTTT 34999 Query 46578 TAACAAAGATTTGCAT 46593 | || || || ||||| Sbjct 34998 TCACGAAAATCTGCAT 34983 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | | |||||| ||||| | || || || || ||||||||||| | Sbjct 35665 CCTCCCCTGAGCCTCAACACAAGATGAAGAGTCGATTCTTTCTGAATATTGTAGTCAGCG 35606 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || | |||||| || || || |||| | |||||||| | || Sbjct 35605 AGAGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGG 35546 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | || |||||||||| ||||| ||| ||| | | | ||||| ||| ||| Sbjct 35545 ATGCCCTCCTTGTCCTGAATCTT-GGCTTTCACGTTGTCAATGGTGTCAGAGCT---TTC 35490 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || | ||||||||||| || || || ||||| |||||||| ||||| Sbjct 35489 CACCTCAAGAGTGATGGTTTTTCCTGTGAGGGTTTTCACAAAGATCTGCAT 35439 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||| || | ||||| || |||| || |||||||||||||| || Sbjct 35401 TCCTTCTGAATGTTGTAATCAGCCAGAGTACGACCGTCTTCAAGCTGCTTGCCGGCAAAG 35342 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | |||||||| | || | || ||||| ||| |||||| ||| | | Sbjct 35341 ATCAACCTTTGCTGGTCTGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTTACGTTA 35282 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| |||||| || | |||||||| || || || || ||||| || Sbjct 35281 TCAATGGTGTCAGAACTTTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTCACG 35222 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 35221 AATATCTGCAT 35211 >seq18302 Length=24432 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || ||||||||||||| ||| | || |||||| ||||| || ||||| | Sbjct 6711 CCTCCCCTCAAACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6770 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | | || || || || || || || || ||||| ||||||||||| | || Sbjct 6771 AGAGTCCTCCCATCCTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 6830 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA--TTCCA 46544 | | ||||||||| ||||| | ||| ||| | || | || || | ||| | Sbjct 6831 ATACCCTCCTTGTCTTGAATCTT-TGCTTTGACGTTGTCAATG-GTATCTGAACTTTCAA 6888 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| || || || || || |||| ||| || ||||| |||||||| Sbjct 6889 CCTCCAATGTAATTGTCTTACCAGTCAACGTCTTGACAAAAATTTGCAT 6937 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||||||||||| ||| | || |||||| ||||| || ||||| | Sbjct 6483 CCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6542 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || || || || || || || ||||| ||||||||||| | || Sbjct 6543 AGTGTCCTGCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 6602 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| ||||| | ||| | | | | | | || || || ||||| Sbjct 6603 ATACCCTCCTTGTCTTGAATCTT-TGCTTTAACATTGTCAATGGTATCTGAGGACTCCAC 6661 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || || || ||||| || || || ||||| ||||| Sbjct 6662 CTCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564999070995960