Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq26577 134 2e-26 seq24551 122 1e-22 >seq26577 Length=143161 Score = 134 bits (148), Expect = 2e-26 Identities = 292/425 (69%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCAA 15975 ||||| ||||| | ||||| ||||| || | || | ||||| || ||| || | | Sbjct 122698 TCAAGAATATCTGCACGATTGGTTGCCGCAACAACTATTATACCAGTATTTCCTT--CGA 122755 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 |||||||||| || ||||| || ||||| | || ||||||| ||||||||| || | Sbjct 122756 AACCATCCATTTCAGTCAATAGTTGGTTCAGCGTCTGTTCCCTTTCATCATTTCCT--CC 122813 Query 16036 TACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | | | |||| | | ||| || || |||||||| ||||||| || || ||||| Sbjct 122814 TCCAATTCCAGTCCCTCTTTGGCGCCCAACAGCATCAATTTCATCAACAAATACAATGCA 122873 Query 16094 TGGTTGATTTT-CGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || ||||| | | | ||| ||| ||||| || || || ||| || ||||||| Sbjct 122874 AGGAGCATTTTCCTTGGCCTTCTTGAAA-AGATCACGGACTCGAGAGGCTCCTACACCAA 122932 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| || || | || | ||| |||| || || || ||| | |||||| Sbjct 122933 CAAACATCTCAACGAATTCTGAACCTGAA-ATTGAGAAAAATGGAACACCCGCTTCACCA 122991 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || || || || || || || ||||| || ||| | || || ||||| Sbjct 122992 GCAATTGCCTTTGCTAGCAGGGTTTTCCCAGTACCAGGAGGACCAACAAGAAGAACACCT 123051 Query 16272 CGTGGAAT-CTTGGCGCCACTTCCAAAGT--ATCTCTCAGGTTGCTTAAGAAAATCCACA 16328 |||||| | | | ||||| | ||| |||||||||||| ||| | ||| ||||| Sbjct 123052 TTTGGAATACGAGCCCCCACTGC---AGTAAATCTCTCAGGTTTCTTCAAAAATTCCACG 123108 Query 16329 ATCTC 16333 | ||| Sbjct 123109 ACCTC 123113 >seq24551 Length=72183 Score = 122 bits (134), Expect = 1e-22 Identities = 200/281 (71%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| || ||||| ||||| || ||||| || |||| |||||||| | | Sbjct 56434 AACCCATCCATTTCAGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTTCCA--C 56491 Query 16035 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | | | || |||| | ||| ||||||| ||||||||||||||||| || || |||| Sbjct 56492 CTCCAAGTCCTGCACCTCTCTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATGC 56551 Query 16093 ATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCACA 16148 | ||| ||||| || || ||||| | ||||| || || || | || |||||| Sbjct 56552 AAGGT--GCTTTCGATTTCGCCTTCTCAAACAAATCCC-TA-ACTCTAGAAGCTCCCACA 56607 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 16208 || ||||||| ||| ||||| | || || | ||| || || || ||| || |||| Sbjct 56608 CCCACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAACGGTACACCAGCTTCA 56667 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 || || | |||| || | ||| ||||| || |||||||| Sbjct 56668 CCAGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGG 56708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620479569908560