Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq26577 131 2e-25 seq24551 114 2e-20 seq24630 98.7 1e-15 >seq26577 Length=143161 Score = 131 bits (144), Expect = 2e-25 Identities = 289/424 (68%), Gaps = 16/424 (4%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAA 9282 ||||| ||||| | ||||| || || || | || | ||||| || ||| || | | Sbjct 122698 TCAAGAATATCTGCACGATTGGTTGCCGCAACAACTATTATACCAGTATTTCCTT--CGA 122755 Query 9283 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9342 |||||||||| || ||||| |||||||| | || ||||||| ||||||||| || | Sbjct 122756 AACCATCCATTTCAGTCAATAGTTGGTTCAGCGTCTGTTCCCTTTCATCATTTCCT--CC 122813 Query 9343 TACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 | | | |||| | | ||| || || |||||||| ||||||| || ||||| || Sbjct 122814 TCCAATTCCAGTCCCTCTTTGGCGCCCAACAGCATCAATTTCATCAACAAATACAATGCA 122873 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 || |||||| ||| | | || ||||| || || | ||| || |||||||| Sbjct 122874 AGGAGCATTTTCCTTGGCCTTCTTGAAAAGATCACGGACTCGAGAGGCTCCTACACCAAC 122933 Query 9461 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9519 ||||||||| || || | || | ||| |||| || || || ||| | |||||| | Sbjct 122934 AAACATCTCAACGAATTCTGAACCTGAA-ATTGAGAAAAATGGAACACCCGCTTCACCAG 122992 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCC 9579 |||| || || || || || || || ||||| || ||| | || || |||| Sbjct 122993 CAATTGCCTTTGCTAGCAGGGTTTTCCCAGTACCAGGAGGACCAACAAGAAGAACACCTT 123052 Query 9580 GTGGAAT-CTTGGCGCCACTTCCAAAGT--ATCTCTCAGGTTGCTTGAGAAAATCCACAA 9636 |||||| | | | ||||| | ||| |||||||||||| ||| | ||| ||||| | Sbjct 123053 TTGGAATACGAGCCCCCACTGC---AGTAAATCTCTCAGGTTTCTTCAAAAATTCCACGA 123109 Query 9637 TCTC 9640 ||| Sbjct 123110 CCTC 123113 >seq24551 Length=72183 Score = 114 bits (126), Expect = 2e-20 Identities = 195/279 (70%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || |||||||| || ||||| || || || ||||| || |||| |||||||| | | Sbjct 56434 AACCCATCCATTTCAGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTTCCA--C 56491 Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399 | | | || |||| | ||| ||||||| ||||||||||||||||| || ||||| | Sbjct 56492 CTCCAAGTCCTGCACCTCTCTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATGC 56551 Query 9400 ATGGTTGATTTTCG--CGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 | ||| ||||| || | ||||| | ||| | ||| || || |||||||| Sbjct 56552 AAGGT--GCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGAAGCTCCCACACC 56609 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 ||||||| ||| ||||| | || || | ||| || || || ||| || |||||| Sbjct 56610 CACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAACGGTACACCAGCTTCACC 56669 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || | |||| || | ||| ||||| || |||||||| Sbjct 56670 AGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGG 56708 >seq24630 Length=73539 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || |||||||| || |||||||| || || ||||| | ||| ||| ||||| | ||| Sbjct 27530 TGAGGTCTTGGAGTGCCAGCATTAAACAGCGTTGGAGATGCATGAGTGAACCAGCGTTGA 27471 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 |||||| | ||||||| | | |||| ||||| || ||| |||||| || | | Sbjct 27470 GACATCAAATGATATGTCTTGATGGCAGATTCAATATCCTCCTTGTGGATTCCAACAGAT 27411 Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAG 107347 || | ||| | ||||| ||| || |||| | | | || | | | | ||| || Sbjct 27410 ACTCTCATCAGCATGTGTTGTGGCCTTTCTACAATTTTTCCCTGAATCTTTAAAAGGTAA 27351 Query 107348 CTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTC 107391 | ||||||||||||||| |||||||||| || | ||| |||| Sbjct 27350 GACCTCTCAAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTC 27307 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||||| |||| | || ||||| || | ||| |||||||| || ||| | |||| Sbjct 28970 ACATATCTTGGTAAAGCAATTGAAGCAAGATTACAAACAGCAGTTTCAGTTGGACTTGTG 28911 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | ||| |||||||||||||| ||| ||| || || || | ||||| ||||| Sbjct 28910 TACTCAATAATCTCTGTACACAAGTTAGAAGACTTGATAGTGCCAAGATTCTGCTGGTTG 28851 Query 106568 CTCTTTTTGTTGCACGCATCCT 106589 || ||| | ||||| | ||||| Sbjct 28850 CTTTTTCTATTGCAAGAATCCT 28829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589730994754520