Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq24612 141 1e-28 >seq24612 Length=73035 Score = 141 bits (156), Expect = 1e-28 Identities = 351/532 (66%), Gaps = 3/532 (1%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 || || ||||||||||| || |||||||| ||||| ||||| ||||| || || ||| Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 ||||| |||||||| || | ||||| | ||||||||||| ||| ||| |||||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAG 59523 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352 ||||| ||||| || ||||| || || | ||| |||| ||| | | || Sbjct 59524 AAAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTT---TCAGAGCCA 59580 Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412 ||||| | ||| | ||||| || |||||| || || || ||||| Sbjct 59581 TCGATCCAACGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTGCC 59640 Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472 || | | ||||| ||| || | || || | || | || ||||| ||| Sbjct 59641 CGGAACAACCTACTCTTTTCGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGTAC 59700 Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532 || || || || ||||| ||||| || || || || ||||| ||| | || |||| Sbjct 59701 ATCTCGGAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCACGCGCCTCAGCA 59760 Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 | ||| ||||| || | ||||| ||| | ||| || ||| || || || || Sbjct 59761 ACTTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAGGCA 59820 Query 37593 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAA 37652 ||||| || ||||| |||| | || ||||| |||||| | || || |||| |||| Sbjct 59821 GCAAAAAACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAA 59880 Query 37653 TCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCA 37704 | | | |||| |||| ||| ||||| || | ||||| ||| ||||| Sbjct 59881 TGACGAGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCA 59932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592066005662920