Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq24549 122 7e-23 seq24416 118 8e-22 seq18302 105 5e-18 seq28317 91.5 1e-13 seq12531 89.7 4e-13 seq10662 84.2 2e-11 seq23505 82.4 6e-11 >seq24549 Length=72154 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||||||| |||| ||||| ||| || ||| ||||| ||||||||||| |||| Sbjct 58278 CCACCCCTTAGGCGCAGCACCAGATGAAGAGTGGATTCTTTCTGAATATTGTAGTCAGCA 58219 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||||| || ||||| |||| | ||| ||||| | ||| Sbjct 58218 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGAGGA 58159 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| ||| ||| || ||| | | || || || || ||| Sbjct 58158 ATGCCTTCCTTGTCCTGAATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 58099 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || ||||| ||||||||||| ||||| |||||||| Sbjct 58098 TCAAGGGTAATAGTCTTTCCAGTCAAAGTTTTCACAAAGATCTGCAT 58052 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| || || |||| ||| | ||| | || |||| ||||||||| ||||| Sbjct 58698 TCTTTCTGAATGTTATAGTCAGCAAGAGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 58639 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| | ||| || || | || | |||||||| || ||||||| || ||| | Sbjct 58638 ATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACATTA 58579 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || ||||||||||| ||||| || || || ||||| || || ||| Sbjct 58578 TCAATGGTATCCGAGCTCTCCACCTCCAAGGTAATAGTCTTCCCAGTCAATGTCTTCACA 58519 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 58518 AAGATCTGCAT 58508 >seq24416 Length=70076 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| |||||| | ||| || || ||||| ||||||||||| |||| Sbjct 35665 CCTCCCCTGAGCCTCAACACAAGATGAAGAGTCGATTCTTTCTGAATATTGTAGTCAGCG 35606 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | | | || |||||||||||||| ||||| ||||||| || || || | ||| Sbjct 35605 AGAGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGG 35546 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| ||| || | | | || || |||||| Sbjct 35545 ATGCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCAGAGCTTTCCACC 35486 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || |||||||| || | ||||| ||||| ||||||||| Sbjct 35485 TCAAGAGTGATGGTTTTTCCTGTGAGGGTTTTCACAAAGATCTGCATC 35438 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || || || || || |||||||||| ||| | | | || ||| Sbjct 35875 ACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAGAGTCCTTCCATCTTCC 35816 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||||||||| ||||| ||||||| |||||||| | ||||| |||||||||||| | Sbjct 35815 AACTGCTTACCAGCAAAAATCAGTCTTTGTTGATCTGGGGGAATGCCCTCCTTGTCCTGA 35756 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || |||||||||| || || || || Sbjct 35755 ATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTTTCCACCTCCAAAGTGATGGTCTTG 35696 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || | ||| || || |||||||||||| Sbjct 35695 CCAGTAAGAGTCTTCACGAAAATCTGCATC 35666 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || ||||| || | ||| | | | || |||| |||||| || || || Sbjct 36086 CTCCTTTTGGATGTTGTAGTCTGCCAGAGTCCTTCCATCTTCCAGCTGCTTCCCTGCGAA 36027 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||||| ||| || || | ||||| ||| |||||||| |||||| || ||| Sbjct 36026 GATCAGTCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTCACATT 35967 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || |||||||||| |||| ||||| || ||||| || || || Sbjct 35966 GTCAATAGTATCAGAACTTTCCACCTCCAGAGTAACGGTTTTCCCAGTCAACGTCTTGAC 35907 Query 48755 AAAAATCTGCATC 48767 ||||||||||||| Sbjct 35906 AAAAATCTGCATC 35894 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || ||||| || | ||| | | | | || || | |||||| || ||||| Sbjct 32007 CTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTACCATCTTCGAGCTGCTTCCCTGCAAA 31948 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| | ||| || || | || | ||||||||||| |||||| || ||| Sbjct 31947 GATCAGCCTCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATT 31888 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || ||||||||||| || || || || || |||||||| || || Sbjct 31887 GTCAATAGTATCAGAACTCTCCACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGAC 31828 Query 48755 AAAAATCTGCAT 48766 |||||||||||| Sbjct 31827 AAAAATCTGCAT 31816 >seq18302 Length=24432 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||||||||||||| || ||| ||| || || || || || || | Sbjct 6483 CCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6542 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | | || || | || ||||| ||||| |||| ||||| || || | |||| Sbjct 6543 AGTGTCCTGCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 6602 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||||| ||| ||| | | | ||||| | ||||||| Sbjct 6603 ATACCCTCCTTGTCTTGAATCTTTGCTTTAACATTGTCAATGGTATCTGAGGACTCCACC 6662 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| || || || || || |||| || || || || ||||||||| Sbjct 6663 TCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATC 6710 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || |||||||| || | || | || | || || | |||||||||||| || Sbjct 6290 CTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCGAA 6349 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||| || | ||||||||| | |||| || ||||| || |||||| ||| ||| Sbjct 6350 TATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATCTTTGCTTTCACATT 6409 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || ||||| ||||||||||| || |||||||| || |||| ||| || || Sbjct 6410 GTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATCGTTTTCCCGGTCAGAGTCTTCAC 6469 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 6470 GAAGATCTGCAT 6481 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | |||||||||||||| || ||| ||| || || || || || || | Sbjct 6711 CCTCCCCTCAAACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6770 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | | | || || | || || || ||||| |||| ||||| || || | |||| Sbjct 6771 AGAGTCCTCCCATCCTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 6830 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||||| ||| || | | | ||||| || ||| Sbjct 6831 ATACCCTCCTTGTCTTGAATCTTTGCTTTGACGTTGTCAATGGTATCTGAACTTTCAACC 6890 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || ||||| || || |||||||| ||||| Sbjct 6891 TCCAATGTAATTGTCTTACCAGTCAACGTCTTGACAAAAATTTGCAT 6937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| |||||||| | || | | | || || | ||||| || ||||| Sbjct 6975 TCTTTCTGAATGTTGTAATCTGCCAGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAG 7034 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| | ||| || || | |||| ||||||||||| |||||| ||| ||| Sbjct 7035 ATCAGCCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTG 7094 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || ||||| ||| ||||||| ||||| || || || ||||| || || ||| Sbjct 7095 TCAATAGTATCTGAACTCTCGACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACA 7154 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 7155 AATATTTGCAT 7165 >seq28317 Length=665 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || |||||||| || | || | || | || || | |||||||||||| || Sbjct 386 CTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCGAA 445 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || | ||||||||| | |||| || ||||| || || ||| ||| ||| Sbjct 446 GATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATTTTTGCTTTCACATT 505 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || ||||| ||||||||||| || || ||||| || |||| ||| || || Sbjct 506 GTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATNGTTTTCCCGGTCAGAGTCTTCAC 565 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 566 GAAGATCTGCAT 577 >seq12531 Length=12345 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || |||||||| || | || | || | || || | |||||||||||| || Sbjct 11951 CTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCGAA 12010 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || | ||||||||| | |||| || ||||| || || ||| ||| ||| Sbjct 12011 GATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATTTTTGCTTTCACATT 12070 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || ||||| ||||||||||| || || ||||| || |||| ||| || || Sbjct 12071 GTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATAGTTTTCCCGGTCAGAGTCTTCAC 12130 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 12131 GAAGATCTGCAT 12142 >seq10662 Length=13073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| |||||||| | || | | | || || | ||||| || ||||| Sbjct 1382 TCTTTCTGAATGTTGTAATCTGCCAGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAG 1441 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| | ||| || || | |||| ||||||||||| |||||| ||| ||| Sbjct 1442 ATCAGCCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTG 1501 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || ||||| ||| ||||||| ||||| || || || ||||| || || ||| Sbjct 1502 TCAATAGTATCTGAACTCTCGACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACA 1561 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 1562 AATATTTGCAT 1572 >seq23505 Length=59109 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| || |||||| || || || ||| ||||| || |||||||| | Sbjct 2670 CCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCC 2729 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | ||||||||| ||||| |||| | ||| || || | || Sbjct 2730 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 2789 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| || ||| | | | || || ||| ||| Sbjct 2790 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACC 2849 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||||| || || || || || || || ||||| || |||||| Sbjct 2850 TCCAGGGTAATGGTCTTCCCGGTGAAGGTCTTCACAAAGATTTGCATC 2897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380780338601979