Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq25228 87.8 4e-12 >seq25228 Length=84379 Score = 87.8 bits (96), Expect = 4e-12 Identities = 176/255 (69%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 || ||| ||||||||||| | |||||| | || ||| | || | || ||| || Sbjct 20257 AGCAGGAAAACTTGATCCTGTGATTGGTAGGGATGAAGAAATCCGAAGGG-TAGTTCGGA 20199 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGTAA 150423 |||| || | | || || || ||| |||| ||| |||| || || ||||||||||| Sbjct 20198 TTCTATCAAGGAGGACAAAGAACAATCCAGTGC-TTA-TTGGAGAGCCTGGTGTTGGTAA 20141 Query 150424 AACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTAT 150483 |||| | | ||||| || |||||||| | || | | |||||||| || | | | Sbjct 20140 AACAGCAGTAGTTGAAGGGCTAGCACAAAGGATTGTTCGAGGTGATGTCCCGAGTAATTT 20081 Query 150484 GAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCG 150543 | |||||| | || | | ||| ||||||| ||||| | ||||| | || ||| | Sbjct 20080 GGCCGATGTTAGACTTATAGCATTGGATATGGGAGCATTAATAGCTGGAGCAAAATATAG 20021 Query 150544 TGGTGAATTCGAAGA 150558 |||||||||||||| Sbjct 20020 AGGTGAATTCGAAGA 20006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147092348276754