Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq18302 89.7 4e-13 seq10662 89.7 4e-13 >seq18302 Length=24432 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||||| || || || || ||||| || || |||| Sbjct 7165 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTCGAGAGTTCA 7106 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || ||| ||| ||||| ||||| | || ||| || Sbjct 7105 GATACTATTGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAG 7046 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| || || ||| | || ||| | || |||| ||||| ||| Sbjct 7045 CAGAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCCTGGCAGATTACAAC 6986 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||||| || |||||| Sbjct 6985 ATTCAGAAAGAATCAACCCTGCAC 6962 >seq10662 Length=13073 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||||| || || || || ||||| || || |||| Sbjct 1572 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTCGAGAGTTCA 1513 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || ||| ||| ||||| ||||| | || ||| || Sbjct 1512 GATACTATTGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAG 1453 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| || || ||| | || ||| | || |||| ||||| ||| Sbjct 1452 CAGAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCCTGGCAGATTACAAC 1393 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||||| || |||||| Sbjct 1392 ATTCAGAAAGAATCAACCCTGCAC 1369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425229181332867