Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq19617 304 4e-78 seq26509 217 4e-52 seq12567 140 9e-29 seq17120 134 4e-27 seq25403 114 4e-21 seq33833 98.7 3e-16 seq14007 95.1 4e-15 seq25748 93.3 1e-14 seq12176 87.8 5e-13 seq26609 84.2 6e-12 seq25183 82.4 2e-11 >seq19617 Length=47181 Score = 304 bits (336), Expect = 4e-78 Identities = 525/758 (69%), Gaps = 6/758 (1%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || | |||||| || || | |||||||| Sbjct 9492 GCTAGGTCTAGAGGGAAGTTATGACAATTACGTTTATGCATAACTTCTATACCAAGGTTA 9433 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGC-AGAGA 21589 |||||||| | || |||||||| || || || || || | | | || | | | ||| Sbjct 9432 GCACGGTTGATGATATCAGCCCAAGTATTAATTACACAGCCTTGA-CTGCCAACTACAGA 9374 Query 21590 TTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTA--GACACGCCAAGCGCAGCA 21647 |||||| || ||||||||||| | ||||||||| || || || || ||||| | Sbjct 9373 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCTATAGTGCTGATACTTAAAGCGAT--A 9316 Query 21648 AACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTA 21707 ||||| |||||||| | || ||| ||||| || ||||| || | ||| || || || Sbjct 9315 AACCAGATACCTACTATAGACCAAGCAGCTAGGAAGAAGTGTAACAAACGAGAGTTGTTG 9256 Query 21708 AAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAA 21767 || |||||||||| || ||| | || |||||||| || | ||| || || ||||| ||| Sbjct 9255 AAACTAGCATATTAGATGATCAATCGGCCAAAATAACCATAAGCGGCTACGATATTATAA 9196 Query 21768 GTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCA 21827 || |||||||||||||| || |||||||||| || | | | || || || || Sbjct 9195 GTTTCTTCCTCTTGACCGAATTTGTAACCATCATTAGCAAATTCATTTTTTGTGGTTTCC 9136 Query 21828 CGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAAT 21887 | || | | || |||| | ||| ||||||||| ||| | || || ||| Sbjct 9135 CTGATCAAACTAAAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 9076 Query 21888 ACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAAC 21947 || || || | || | ||||||||| || |||||||| || ||||||||||||||||| Sbjct 9075 ACACCAGCTATGCCGAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAAT 9016 Query 21948 ACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCC 22007 || | |||| | ||||| || || || || || |||||| ||||||||||| | Sbjct 9015 ACAATCATGAAATTGAAAGTACCAGACATTCCTGGAGGCATACCATCAGAAAAACTTTCT 8956 Query 22008 TGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCA 22067 | || | || || | | ||| || |||| |||| || | |||||| || || ||| Sbjct 8955 TACCCGATTGGGTAGATCAAGAAAACTACAGTAGCAGTTGCAATAGGAGCTGAATATGCA 8896 Query 22068 ACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAA 22127 ||| ||||| || | ||| || || | ||||||| |||||||| || ||||||||| Sbjct 8895 ACAGCAATCCAAGGTCGCATACCCAGATGGAAGCTAAGCTCCCACTCACGACCCATGTAA 8836 Query 22128 GCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGC 22187 | |||| || | ||||| | || | |||| | ||| | || ||||| | | Sbjct 8835 CAAGCTACGCTAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGAACACCATTGTATACC 8776 Query 22188 CATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAA 22225 || ||| || | | |||||| | |||||||| || Sbjct 8775 CACTCACCAGCGGATGTCGCTTCCTAGATTGGGTAAAA 8738 >seq26509 Length=137541 Score = 217 bits (240), Expect = 4e-52 Identities = 246/327 (75%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 116925 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 116866 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG-CTAGCAGAGA 21589 |||||||| | || |||||||| || || || || | || | || | ||| | || Sbjct 116865 GCACGGTTGATGATATCAGCCCAAGTATTAATTACACGACCCTG-GCTGTCTACTACAGG 116807 Query 21590 TTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAA 21649 |||||| || ||||||||||| | |||||||||||| || | || | || | ||| Sbjct 116806 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTAAA 116747 Query 21650 CCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAA 21709 ||| |||||||| |||||||| ||||| || ||||| || | ||| || || || || Sbjct 116746 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTTGAA 116687 Query 21710 GCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGT 21769 ||||||||||||||||| | || |||||||| || ||||| || || ||||| ||| | Sbjct 116686 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAAT 116627 Query 21770 CTCTTCCTCTTGACCAAACTTGTAACC 21796 |||||||||||||| || ||||| || Sbjct 116626 TTCTTCCTCTTGACCGAATTTGTATCC 116600 >seq12567 Length=10708 Score = 140 bits (154), Expect = 9e-29 Identities = 209/293 (71%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 21488 GTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGAATGTC 21547 ||| || || | || |||| ||| || || | |||||||| ||| |||||| || || Sbjct 3926 GTTATGAGCATAACGTTCATACATGACTTCCATACCAAGGTTAGCATGGTTAATGATATC 3985 Query 21548 AGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGC-AGAGATTGGTTAAAGTTGAAAC 21606 |||| | || || || || || | | | || | | | ||||||||| || ||||||| Sbjct 3986 AGCCTAAGTATTAATAACACAACCTTGA-CTGCCAACTACAGATTGGTTGAAATTGAAAC 4044 Query 21607 CATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACAACAG 21666 |||| | |||||||| ||| ||| | || | ||| |||||| ||||| || |||| Sbjct 4045 CATTTAGGTTGAAAGTCATAGTATTGATACCTAAAACAGTAAACCAGATACCGACTACAG 4104 Query 21667 GCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGA 21726 |||| ||| | || ||||| || | ||| || ||||| || |||||||||| ||||| Sbjct 4105 GCCAAGCAACTAGGAAGAAGTGTAACGAACGAGAGTTATTGAAACTAGCATATTAGAAGA 4164 Query 21727 TAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGT--CTCTTCCT 21777 | | | ||||||| || ||||| || | ||||| ||||| || ||||| Sbjct 4165 TCAATCAGTCAAAATAACCATGAGCGGCTATGATATTATAAGTACCTATTCCT 4217 >seq17120 Length=33042 Score = 134 bits (148), Expect = 4e-27 Identities = 208/295 (71%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 21488 GTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGAATGTC 21547 ||| || || || || |||||||| || || | |||||||| |||||||| | || || Sbjct 4694 GTTATGAGCATTACGTTCATGCATGACTTCCATACCAAGGTTAGCACGGTTGATGATATC 4753 Query 21548 AGCCCAGGTGTTGATCACCTGTCCATCAG---CAGCTAGCAGAGATTGGTTAAAGTTGAA 21604 |||||| || || || || | || | | || ||| || |||||| || ||||| Sbjct 4754 AGCCCAAGTATTAATAACACGACCCTGACTGTCAACTACAAG---TTGGTTGAAATTGAA 4810 Query 21605 ACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACAAC 21664 |||||| | |||||||| ||| || | | || | || | |||||| ||||| || || Sbjct 4811 ACCATTTAGGTTGAAAGTCATAGTGGTGATACCTAAAGCGGTAAACCAGATACCGACTAC 4870 Query 21665 AGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAA 21724 |||||| ||| | || ||||| || | ||| || || || || | |||||||| ||| Sbjct 4871 AGGCCAAGCAACTAGGAAGAAGTGTAACGAACGAGAGTTGTTGAAACAAGCATATTAGAA 4930 Query 21725 GATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGT--CTCTTCCT 21777 || | | ||||||| | ||||| || || ||||| ||||| || ||||| Sbjct 4931 TATCAATCAGTCAAAATAACTATGAGCGGCTACGATATTATAAGTACCTGTTCCT 4985 >seq25403 Length=106142 Score = 114 bits (126), Expect = 4e-21 Identities = 148/203 (73%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 21581 TAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAG 21640 || || ||||||||| || ||||||| ||| | ||||||| ||| | | || || Sbjct 12989 TACCATAGATTGGTTGAAATTGAAACTATTTAGATTGAAAGTCATAATC-ATACCTAAAA 12931 Query 21641 CGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGA 21700 || |||||| |||||||| | | |||| | || ||| ||||| || | ||| | Sbjct 12930 AGCGTTAAACCAGATACCTACTATATGCCAAGGAGAAAGGAAGAAGTGCAACGAACGATA 12871 Query 21701 ATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAAT 21760 | || || ||||||||||||||||| | ||| |||||||| || ||| | | ||||| Sbjct 12870 GTAGTTGAAACTAGCATATTGGAAGATTAACCGGCCAAAATAACCATGAACGGATACAAT 12811 Query 21761 ATTGTAAGTCTCTTCCTCTTGAC 21783 ||| ||||| |||| |||||||| Sbjct 12810 ATTATAAGTTTCTTTCTCTTGAC 12788 >seq33833 Length=32722 Score = 98.7 bits (108), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 21587 AGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCAT--GGTAGACACGCCAAGCGCA 21644 ||||||||| || ||||||||||| | |||||||| ||| || || || ||| | Sbjct 3118 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGTCATAGTGTTGATACCTAAAGTG-- 3061 Query 21645 GCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTA 21704 | |||||| ||||| || |||||||| ||| | || ||||| || | | | || || Sbjct 3060 GTAAACCAGATACCGACTACAGGCCAAGCAACTAGGAAGAAGTGTAATGAATGAGAGTTT 3001 Query 21705 TTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTG 21764 || || |||||||||| |||||| | | ||||||| || ||||| | | ||||| Sbjct 3000 TTGAAACTAGCATATTAGAAGATCAATCAGTCAAAATAACCATGAGCGCCTATGATATTA 2941 Query 21765 TAAGT 21769 ||||| Sbjct 2940 TAAGT 2936 >seq14007 Length=15465 Score = 95.1 bits (104), Expect = 4e-15 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 21840 GACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCCACA 21899 || || |||| | ||| ||||||||| ||| | || || ||||| || ||||| Sbjct 14896 GAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCCACG 14955 Query 21900 CCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAG 21959 || | ||||||||| || |||||||| || ||||||||||||||||| || | |||| | Sbjct 14956 CCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAA 15015 Query 21960 TTGAAGGTGCCGGATATCCC 21979 ||||| || || || || || Sbjct 15016 TTGAAAGTACCAGAGATTCC 15035 >seq25748 Length=124008 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 21894 GCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGC 21953 ||||| || ||||||||||| || |||||||| || ||||||||||||||||| | || Sbjct 35619 GCCACGCCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATA-CAAT 35561 Query 21954 ATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCA 22013 || | ||||| || || || | |||| |||||| ||||||||||| || || || Sbjct 35560 ATAAAATTGAAAGTACCAGAGAATCCCAGAGGCATACCATCAGAAAAACTTCCTTGACCG 35501 Query 22014 AACGGATA-AACAAGGAA 22030 | ||||| | |||| || Sbjct 35500 ATTGGATAGATCAAGAAA 35483 >seq12176 Length=10089 Score = 87.8 bits (96), Expect = 5e-13 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 21960 TTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGA 22019 ||||| || || || || || | |||||| ||||||||||| || || || | || Sbjct 9879 TTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGG 9938 Query 22020 TAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAG 22079 || | | ||| || || || ||||| || ||||||| || || |||||| ||||| Sbjct 9939 TAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGTTGAATATGCAACAGCAATCCAA 9998 Query 22080 GGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCA 22139 || | || || || || ||||||| |||||||| || |||||||| | | |||| Sbjct 9999 GGTCAAATACCCAGACGGAAGCTAAGCTCCCACTCACGAGCCATGTAACAAGCTATGCCA 10058 Query 22140 ATGAGGAAGTG 22150 | | |||||| Sbjct 10059 AGTAAGAAGTG 10069 >seq26609 Length=146573 Score = 84.2 bits (92), Expect = 6e-12 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 21474 AGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCA 21533 ||||| || |||||||| || || || || |||||||| | | | |||||||| ||| Sbjct 39214 AGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAATTTTCATACCAAGGTTAGCA 39273 Query 21534 CGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGG 21593 ||||| | || ||| ||| || || || | || | | | | | | ||||||| Sbjct 39274 CGGTTGATGATATCACTCCAAGTATTAATTATATGATCTTGATTGTCAATTACAGATTGG 39333 Query 21594 TTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGT--AGACACGCCAAGCGCAGCAAACC 21651 ||||| ||||||| ||| | ||| |||||||| || || | ||||| | ||||| Sbjct 39334 TTAAAATTGAAACTATTTAGGTTCAAAGCCATAGTGCTGATATCTAAAGCG--GTAAACC 39391 Query 21652 AAATACCTA 21660 ||||||||| Sbjct 39392 AAATACCTA 39400 >seq25183 Length=164263 Score = 82.4 bits (90), Expect = 2e-11 Identities = 98/132 (74%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 22099 AGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGG 22158 ||||||| |||||||| || ||||||||| | ||||||| | |||||| | || Sbjct 133901 AGCTAAGCTCCCACTCACGACCCATGTAACAAGCTACGCCAAGTAAGAAGTGTAGAACAA 133960 Query 22159 TGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTG 22218 | |||| | ||||| |||||||| | ||||||||||| | || |||| ||| |||| Sbjct 133961 TTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAATGGGTGCCGCTT-CCAGATTG 134019 Query 22219 GGTAGAAGTGTA 22230 | || || |||| Sbjct 134020 GATAAAAATGTA 134031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146149189019940