Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq26577 111 2e-19 seq24630 98.7 1e-15 seq24551 91.5 2e-13 >seq26577 Length=143161 Score = 111 bits (122), Expect = 2e-19 Identities = 281/420 (67%), Gaps = 8/420 (2%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAG-ATCCC 175289 ||| | ||||| ||| | ||| |||| ||||||| | || | |||| | | | || || Sbjct 123113 GAGGTCGTGGAATTTTTGAAGAAACCTGAGAGATTTACTGCA-GTGGGGGCTCGTATTCC 123055 Query 175290 CCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCAT 175349 ||| | ||||| | ||| || ||||| || || ||||| || || || || Sbjct 123054 AAAAGGTGTTCTTCTTGTTGGTCCTCCTGGTACTGGGAAAACCCTGCTAGCAAAGGCAAT 122995 Query 175350 CGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGT 175408 || |||||| | ||| ||||| || || | || | || | || || ||||||| Sbjct 122994 TGCTGGTGAAGCGGGTGTTCCATTTTTCTCAATT-TCAGGTTCAGAATTCGTTGAGATGT 122936 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||||||||| || ||| | || || ||||| || | | ||| |||||| | Sbjct 122935 TTGTTGGTGTAGGAGCCTCTCGAGTCCGTGATCTTTTCAAGAAGGCCAAGGAAAATGCTC 122876 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGG 175526 | || ||||| || ||||||| |||||||| || || ||| | | |||| | | Sbjct 122875 CTTGCATTGTATTTGTTGATGAAATTGATGCTGTTGGGCGCCAAAGAGGGACTGGAATTG 122816 Query 175527 TATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGG 175586 | | || |||||| || || ||||| || | || |||||| | || || |||||||| Sbjct 122815 GAGG--AGGAAATGATGAAAGGGAACAGACGCTGAACCAACTATTGACTGAAATGGATGG 122758 Query 175587 CTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGA 175646 || || | ||||| || | ||| ||||||| || ||||| | ||||| ||||| Sbjct 122757 TTTCGAAGGAAATACTGGTATAATAGTTGTTGCGGCAACCAATCGTGCAGATATTCTTGA 122698 >seq24630 Length=73539 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 75131 GACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTC 75190 |||| ||| | || |||||||||| ||||||||||||||| | || ||| | | | Sbjct 27307 GACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCTTACCTTTTAAAGATT 27366 Query 75191 GATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCAC 75250 | || | | | |||| ||||| ||||| | ||| | || | | || |||||| Sbjct 27367 CAGGGAAAAATTGTAGAAAGGCCACAACACATGCTGATGAGAGTATCTGTTGGAATCCAC 27426 Query 75251 GGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT 75310 ||| || ||||| |||| | | ||||||| | |||||| ||| | ||||| | Sbjct 27427 AAGGAGGATATTGAATCTGCCATCAAGACATATCATTTGATGTCTCAACGCTGGTTCACT 27486 Query 75311 CACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354 || ||| | ||||| || || |||||||| || |||||||| || Sbjct 27487 CATGCATCTCCAACGCTGTTTAATGCTGGCACTCCAAGACCTCA 27530 >seq24551 Length=72183 Score = 91.5 bits (100), Expect = 2e-13 Identities = 190/279 (68%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 |||||||| || |||||||| | || |||| | || |||||| | ||| || || Sbjct 56708 CCAGGTACTGGGAAGACCCTTTTAGCTAGAGCAGTAGCTGGTGAAGCTGGTGTACCGTTT 56649 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || || | || || | ||||| ||| ||||||| |||||||| || || ||| Sbjct 56648 TTCTCTTGTGCAGCATCAGAGTTTGTTGAGTTGTTTGTGGGTGTGGGAGCTTCTAGAGTT 56589 Query 175435 CGCGATCTCTTTGAAATCGCCCG--CGAAAATCAACCATGTATTGTCTTCATTGATGAGA 175492 | ||| | ||||| | || ||||| ||| || ||||| || |||||||||| Sbjct 56588 AGGGATTTGTTTGAGAAGGCGAAATCGAAAGC--ACCTTGCATTGTGTTTATTGATGAGA 56531 Query 175493 TTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGA 175550 ||||||| ||||| | ||| | | || || | | | | | |||||| ||||| || Sbjct 56530 TTGATGCTGTGGGAAGGCAGAGAGGTGCAGGACTTGGAGG--TGGAAATGATGAGAGGGA 56473 Query 175551 ACAAACAATTAATCAACTACTCACCGAGATGGATGGCTT 175589 || || || ||||| || | || || |||||||| || Sbjct 56472 GCAGACTATCAATCAGCTCTTGACTGAAATGGATGGGTT 56434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596317004974240