Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq19617 304 4e-78 seq26509 217 4e-52 seq12567 140 9e-29 seq17120 134 4e-27 seq25403 114 4e-21 seq33833 98.7 3e-16 seq14007 95.1 4e-15 seq25748 93.3 1e-14 seq12176 87.8 5e-13 seq26609 84.2 6e-12 seq25183 82.4 2e-11 >seq19617 Length=47181 Score = 304 bits (336), Expect = 4e-78 Identities = 525/758 (69%), Gaps = 6/758 (1%) Strand=Plus/Plus Query 41462 TTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTC 41521 || |||||||| | |||||| | | || ||| ||| | ||||| || | ||| | Sbjct 8738 TTTTACCCAATCTAGGAAGCGACATCCGCTGGTGAGTGGGTATACAATGGTGTTCCTTAT 8797 Query 41522 CAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAA 41581 |||| | || | ||||| | || |||| | ||||||||| || |||||||| Sbjct 8798 GAACTAATTGTTCTACACTTTTTACTTAGCGTAGCTTGTTACATGGGTCGTGAGTGGGAG 8857 Query 41582 CTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCC 41641 ||||||| | || || ||| | || ||||| |||||| || || |||||| | || Sbjct 8858 CTTAGCTTCCATCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTATTGCA 8917 Query 41642 GCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATG 41701 |||| |||| || ||| | | || || | || | | ||||||||||| |||| Sbjct 8918 ACTGCTACTGTAGTTTTCTTGATCTACCCAATCGGGTAAGAAAGTTTTTCTGATGGTATG 8977 Query 41702 CCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATT 41761 || || || || || || ||||| | |||| | || ||||||||||||||||| || Sbjct 8978 CCTCCAGGAATGTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATC 9037 Query 41762 CTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCT 41821 |||||||| || ||||||||| | || | || || ||||| || || | ||| | Sbjct 9038 CTTATGCACCCATTTCACATGTTCGGCATAGCTGGTGTATTCGGCGGCTCCCTATTCAGT 9097 Query 41822 GCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCA 41881 |||||||| ||| | |||| || | | || | || || || || | | | Sbjct 9098 GCTATGCATGGTTCCTTGGTAACTTTTAGTTTGATCAGGGAAACCACAAAAAATGAATTT 9157 Query 41882 CAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCAC 41941 || |||||||||| || |||||||||||||| ||||| ||||| || || ||| | Sbjct 9158 GCTAATGATGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTTAT 9217 Query 41942 GGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCAT 42001 || |||||||| || | ||| || |||||||||| || || || || ||| | || Sbjct 9218 GGTTATTTTGGCCGATTGATCATCTAATATGCTAGTTTCAACAACTCTCGTTTGTTACAC 9277 Query 42002 TTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TA 42059 ||||| || ||||| ||| || | |||||||| |||||| ||||| || || | Sbjct 9278 TTCTTCCTAGCTGCTTGGTCTATAGTAGGTATCTGGTTT--ATCGCTTTAAGTATCAGCA 9335 Query 42060 CCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCT-GCTAGCTGCTGATGGA 42118 | || ||||||||| | ||||||||||| || ||||||||| | | | || | | | || Sbjct 9336 CTATAGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGGCAG-TCAAGGC 9394 Query 42119 CAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATG 42178 || || || || |||||||| || | |||||||| |||||||| | || || ||| Sbjct 9395 TGTGTAATTAATACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATAGAAGTTATG 9454 Query 42179 CATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 ||| | || || || |||||||| || ||||| || Sbjct 9455 CATAAACGTAATTGTCATAACTTCCCTCTAGACCTAGC 9492 >seq26509 Length=137541 Score = 217 bits (240), Expect = 4e-52 Identities = 246/327 (75%), Gaps = 2/327 (1%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 || ||||| || |||||||||||||| | ||| ||||| || || ||||| || |||||| Sbjct 116600 GGATACAAATTCGGTCAAGAGGAAGAAATTTATAATATCGTAGCCGCTCATGGTTATTTT 116659 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | ||||||||||||||||| || || || || ||| | || ||||| || Sbjct 116660 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTA 116719 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070 ||||| |||||||| |||||||| |||||| | || | || | || ||||||||| Sbjct 116720 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTC 116779 Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAG-CTGCTGATGGACAGGTGATCAA 42129 ||| | ||||||||||| || |||||| || | ||| | || | || | || || || Sbjct 116780 AACCTAAATGGTTTCAATTTCAACCAACCTGTAGTAGACAGC-CAGGGTCGTGTAATTAA 116838 Query 42130 CACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAA 42189 || |||||||| || | |||||||| |||||||| | || || |||||||| || || Sbjct 116839 TACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 116898 Query 42190 CGCACACAACTTCCCGCTTGACCTTGC 42216 || || |||||||| || ||||| || Sbjct 116899 TGCTCATAACTTCCCTCTAGACCTAGC 116925 >seq12567 Length=10708 Score = 140 bits (154), Expect = 9e-29 Identities = 209/293 (71%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 41910 AGGAAGAG--ACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCA 41967 ||||| || ||||| ||||| | || ||||| || ||||||| | | |||||| | Sbjct 4217 AGGAATAGGTACTTATAATATCATAGCCGCTCATGGTTATTTTGACTGATTGATCTTCTA 4158 Query 41968 ATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGT 42027 ||||||||| || ||||| || ||| | || ||||| || | ||| |||||||| || Sbjct 4157 ATATGCTAGTTTCAATAACTCTCGTTCGTTACACTTCTTCCTAGTTGCTTGGCCTGTAGT 4098 Query 42028 AGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAA 42087 ||||| |||||| ||| | || | ||| ||| |||||||| | ||||||||||| Sbjct 4097 CGGTATCTGGTTTACTGTTTTAGGTATCAATACTATGACTTTCAACCTAAATGGTTTCAA 4038 Query 42088 CTTTAACCAATCTCT-GCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTC 42146 || ||||||||| | | | || | | | || || || || || | |||||| || Sbjct 4037 TTTCAACCAATCTGTAGTTGGCAG-TCAAGGTTGTGTTATTAATACTTAGGCTGATATCA 3979 Query 42147 TTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAAC 42199 |||||| ||| |||||||| | || || ||| |||| || | || || ||| Sbjct 3978 TTAACCATGCTAACCTTGGTATGGAAGTCATGTATGAACGTTATGCTCATAAC 3926 >seq17120 Length=33042 Score = 134 bits (148), Expect = 4e-27 Identities = 208/295 (71%), Gaps = 8/295 (3%) Strand=Plus/Minus Query 41910 AGGAAGAG--ACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCA 41967 ||||| || ||||| ||||| || || ||||| | ||||||| | | || ||| | Sbjct 4985 AGGAACAGGTACTTATAATATCGTAGCCGCTCATAGTTATTTTGACTGATTGATATTCTA 4926 Query 41968 ATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGT 42027 ||||||| | || || || || ||| | || ||||| || | ||| |||||||| || Sbjct 4925 ATATGCTTGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGTTGCTTGGCCTGTAGT 4866 Query 42028 AGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAA 42087 ||||| |||||| | || | || | | || ||| |||||||| | ||||||||||| Sbjct 4865 CGGTATCTGGTTTACCGCTTTAGGTATCACCACTATGACTTTCAACCTAAATGGTTTCAA 4806 Query 42088 CTTTAACCAATCTCTGCTAGCTG---CTGATGGACAGGTGATCAACACCTGGGCTGACAT 42144 || |||||| || ||| || | | || | || || || || |||||||| || Sbjct 4805 TTTCAACCAA---CTTGTAGTTGACAGTCAGGGTCGTGTTATTAATACTTGGGCTGATAT 4749 Query 42145 TCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAAC 42199 | |||||||| |||||||| | || || |||||||| || || || || ||| Sbjct 4748 CATCAACCGTGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAAC 4694 >seq25403 Length=106142 Score = 114 bits (126), Expect = 4e-21 Identities = 148/203 (73%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 41904 GTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCT 41963 |||||||| |||| ||||| |||||||| | | ||| || |||||||| ||| | |||| Sbjct 12788 GTCAAGAGAAAGAAACTTATAATATTGTATCCGTTCATGGTTATTTTGGCCGGTTAATCT 12847 Query 41964 TCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTG 42023 ||||||||||||| || || | | ||| | || ||||| ||| || | |||| | Sbjct 12848 TCCAATATGCTAGTTTCAACTACTATCGTTCGTTGCACTTCTTCCTTTCTCCTTGGCATA 12907 Query 42024 TTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTT 42083 | |||||||| |||||| || || || | | ||| ||||||| | ||| ||| Sbjct 12908 TAGTAGGTATCTGGTTTAACGCTTTTTAGGTAT-GATTATGACTTTCAATCTAAATAGTT 12966 Query 42084 TCAACTTTAACCAATCTCTGCTA 42106 |||| || ||||||||| || || Sbjct 12967 TCAATTTCAACCAATCTATGGTA 12989 >seq33833 Length=32722 Score = 98.7 bits (108), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 41918 ACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGC 41977 ||||| ||||| | | ||||| || ||||||| | | |||||| |||||||||| Sbjct 2936 ACTTATAATATCATAGGCGCTCATGGTTATTTTGACTGATTGATCTTCTAATATGCTAGT 2995 Query 41978 TTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGG 42037 || || || || | | | || ||||| || | ||| |||||||| || ||||| ||| Sbjct 2996 TTCAAAAACTCTCATTCATTACACTTCTTCCTAGTTGCTTGGCCTGTAGTCGGTATCTGG 3055 Query 42038 TTTGCTGCGCTTGGCGTGTCTACC--ATGGCTTTCAACTTGAATGGTTTCAACTTTAACC 42095 ||| | | ||| || || || ||| |||||||| | ||||||||||| || |||| Sbjct 3056 TTTAC--CACTTTAGGTATCAACACTATGACTTTCAACCTAAATGGTTTCAATTTCAACC 3113 Query 42096 AATCT 42100 ||||| Sbjct 3114 AATCT 3118 >seq14007 Length=15465 Score = 95.1 bits (104), Expect = 4e-15 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 41708 GGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATG 41767 || || || || || ||||| | |||| | || ||||||||||||||||| || |||||| Sbjct 15035 GGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATG 14976 Query 41768 CATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATG 41827 || || ||||||||| | || ||||| || ||||| || || | ||| ||||||| Sbjct 14975 CACCCATTTCACATGTTAGGCGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATG 14916 Query 41828 CACGGTAGCCTGGTCACGTC 41847 || ||| | |||| || || Sbjct 14915 CATGGTTCCTTGGTAACTTC 14896 >seq25748 Length=124008 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 41657 TTCCTTGTT-TATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATC 41715 || |||| | ||||| | || || || ||||||||||| |||||| |||| | || Sbjct 35483 TTTCTTGATCTATCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTGGGATTCTC 35542 Query 41716 CGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTT 41775 || || ||||| | || || | ||||||||||||||||| || |||||||| || || Sbjct 35543 TGGTACTTTCAATTTTATATTG-TATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 35601 Query 41776 TCACATGCTGGGTGTGGC 41793 ||||||||| || ||||| Sbjct 35602 TCACATGCTAGGCGTGGC 35619 >seq12176 Length=10089 Score = 87.8 bits (96), Expect = 5e-13 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 41537 CACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTA 41596 |||||| | ||||| | | |||||||| || |||||||| ||||||| || || Sbjct 10069 CACTTCTTACTTGGCATAGCTTGTTACATGGCTCGTGAGTGGGAGCTTAGCTTCCGTCTG 10010 Query 41597 GGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTG 41656 || || | || ||||| |||||| || || ||||||| || ||||| || || || Sbjct 10009 GGTATTTGACCTTGGATTGCTGTTGCATATTCAACTCCTGTTGCAGCTGCTACCGCAGTT 9950 Query 41657 TTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCC 41716 ||| | | || || | || || || ||||||||||| |||||| | || || || Sbjct 9949 TTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCT 9890 Query 41717 GGCACCTTCAA 41727 || || ||||| Sbjct 9889 GGTACTTTCAA 9879 >seq26609 Length=146573 Score = 84.2 bits (92), Expect = 6e-12 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 42027 TAGGTATTTGGTTTGCTGCGCTTGGCGTGTCT--ACCATGGCTTTCAACTTGAATGGTTT 42084 |||||||||||||| | ||||| | || || |||||||| ||| | ||| |||| Sbjct 39400 TAGGTATTTGGTTTAC--CGCTTTAGATATCAGCACTATGGCTTTGAACCTAAATAGTTT 39343 Query 42085 CAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACAT 42144 ||| |||||||||||| | | | | | | || | || || || ||| ||| || Sbjct 39342 CAATTTTAACCAATCTGTAATTGACAATCAAGATCATATAATTAATACTTGGAGTGATAT 39283 Query 42145 TCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCC 42204 | |||||||| |||||||| | | | |||||||| || || || || |||||||| Sbjct 39282 CATCAACCGTGCTAACCTTGGTATGAAAATTATGCATGAACGTAATGCTCATAACTTCCC 39223 Query 42205 GCTTGACCT 42213 || ||||| Sbjct 39222 TCTAGACCT 39214 >seq25183 Length=164263 Score = 82.4 bits (90), Expect = 2e-11 Identities = 98/132 (74%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 41457 TACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTC 41516 |||| || || ||||| ||| |||| || | ||||||||||| | |||||||| |||| Sbjct 134031 TACATTTTTATCCAATCTGG-AAGCGGCACCCATTGATGAATGGTTATACAACGGTGGTC 133973 Query 41517 CATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGT 41576 | | |||| | || | |||||| | ||||||| | ||||||||| || |||| Sbjct 133972 CTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGT 133913 Query 41577 GGGAACTTAGCT 41588 |||| ||||||| Sbjct 133912 GGGAGCTTAGCT 133901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146155586445592